Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1788 ATGGCTTCAAGAAATGGTGAAGAGAAAGTTGAACATGGCTTCAATGATTTTCATGAAACAAAGAAAAAGAATGATTGGATCCTTTTGTCTCTTAGGGTGGTTGCATTTTTTGCAACTGCAGCTGCAACACTTGTGATGGCACTCAATAAACAGACCAAAAGTTTTGTTATTGGCACCGTTGGTAACACCCCATTAACTGCTACTCTTTCTGCCAAATTTAATCAAACTCCAGCTTTTGTGTTCTTTGTGATAGCCAATGGAAATGCTAGTCTCCATAACTTGGTGATGATTGCATTAGATATATTAGGACCCCAATATGATTACAAAGGACTTCGCCTTGCATTGATTGCAATATTAGACATGTTAACTATGGCTCTGGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCAGCATTGGGAAGAAATGGTAATTCACATGCAAGATGGGATAAGATTTGTGACAAATTTGAAAGCTATTGCAACAGAGGTGGTGGTGCCCTTATTGCTTCTTTCATTGGCTTCATTCTTCTCTTGATTATCACTGTCATGTCCATTTCCAAGCTTCTCAAGCCTAATCGCATTAACCATGCTCCCAGTCCTTGA 606 0.396 MASRNGEEKVEHGFNDFHETKKKNDWILLSLRVVAFFATAAATLVMALNKQTKSFVIGTVGNTPLTATLSAKFNQTPAFVFFVIANGNASLHNLVMIALDILGPQYDYKGLRLALIAILDMLTMALASAGDGAATFMSALGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSISKLLKPNRINHAPSP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1788 201 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 17 193 - -
Mtr2g1788 201 PANTHER CASP-LIKE PROTEIN 1B2 17 193 - -
Mtr2g1788 201 Pfam Casparian strip membrane protein domain 22 177 IPR006702 -
Mtr2g1788 201 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 29 188 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1788 Mtr-Chr2 20773924 20775767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1788 - - gmx:100792043 305.834