Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1745 ATGGCTCCAATACGCTCCACAGGATTTGTTGATCCTGGTTGGGATCATGGCATTGCTCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGGAAAGTTGTTAGTGGTGGGATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATACTGTGAAAAGGCTCCAGAGGAAGTCTACCTAAAAATGAAGGAAAATCTGGAAGGGTGTCGTTCAAATAAGAAACAAAAGCAAGTTGATGCACAAGCATATATGAATTTTCAGTCTAATGATGATGAAGATGATGAAGAGCAAGTTGGGTGTAGAAGCAAAGGAAAGCAATTGATGGATGGCAGGAATGTATCTGTAAATTTAACTCCTCTTCGGTCCTTAGGATATGTTGACCCAGGGTGGGAACACGGTGTTGCTCAGGATGAGAGAAAAAAAAAAGTCAAATGCAGCTACTGTGAGAAAGTTGTTAGTGGCGGTATTAATAGATTTAAACAACATTTGGCTAGGATTCCTGGAGAGGTAGCACCTTGTAAAAGTGCTCCAGAAGAAGTTTATCTTAAAATAAAAGAAAATATGAAATGGCATCGCACTGGAAAGAGACATAGGCAACCCGAGGCTAAGGATCTGATGCCTTTCTATCCAAAGTCTGATAATGAAGATGATGAGTATGAACAGCAGGAAGATACTTTGCATCATATGAACAAGGAAGCTTTGATTGATATTGATAGGAGATACTCTAAAGATACAGGAAAGACCTTTAAGGGAATGTCCTCTAATACTAGCCCAGAACCAGCGTTGAGAAGATCAAGATTAGATAGTTTTTACTTGAAACATCCCACGAATCAGAATCTTCAAACTTGCAAACAACTAAAAGTTAAGACAGGACCCACTAAGAAATTACGCAAGGAAGTTTTTTCTTCAATTTGCAAGTTCTTTTGCCATGCAGGAATTCCTTTACAAGCTGCAGACTCTGTATATTTTCATAAAATGCTGGAATTGGCTGGTCAATATGGACAAGGACTGGCATGCCCATCCAGCCAACTTATTTCGGGTCGCTTTTTGCAGGAGGAAATCAATTCCATTAAGAATTACCTTGCTGAATATAAGGCTTCCTGGGCAATCACTGGTTGTTCGATAATGGCTGATAGTTGGAGAGATGCACAGGGTAGGACAATTATTAACTTTCTTGTTTCATCGCCTCATGGTGTATACTTTGTTTCTTCAGTTGATGCCACTAATGTAGTAGAAGATGCAACATATTTATTTAAGCTTTTGGACAAAGTAGTGGAAGAACTAGGTGAGGAAAATGTAGTGCAGGTAATAACTGAAAATACTCCTAACTATAAAGCTGCTGGAAAAATGCTTGAAGAAAGGAGAAGGAATTTGTTCTGGACGCCTTGTGCTATCTATTGTATTAATCAGGTGCTTGAAGATTTTCTGAAGATTAGATGTGTAGAAGAGTGCATGGAAAAGGGCCAGAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAGTGAATTTACCCATGGGAACGAGCTTCTAAAGCCAGCTGGCACCCAGTGTGCTTCTAGCTTTGCTACATTGCAGAATTTGTTGGATCACCGAGTTAGTCTCAGAAGAATGTTTCTTTCAAACAAATGGATGTCATCCAGGTTCTCCAGTTCAAGCCAGGGGAAAGAGGTGCAAAAAATTGTTTTGAATGTCACATTTTGGAAGAAAATGCAGTCTGTGAGGAATTCAGTATATCCGATATTGCAAGTGTTTCAAAAGGTGTCTAGTGGCGAGAGCTTGTCAATGCCATATATATATAACGACTTGTACAGGGCAAAACTTGCAATCAAATCTATTCATGGCGATGATGCACGGAAATATGAGCCATTCTGGAAGGTGATAGACAGGCACTGTAACTCTCTGTTTTGTCATCCTCTTTACTTGGCTGCTTACTTCTTGAATCCTTCATACCGATATCGTCAAGATTTTGTTTCGCATTCTGATGTAGTACGTGGTCTGAATGAATGCATTGTTCGGCTAGAACTAGATAATATGAGACGAATATCTGCATCGATGCAAATTCCTCATTATAATTCAGCTCAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGGTCTTGAACCAGCTGCTTGGTGGCAACAACATGGAATAAGTTGCTTGGAGTTGCAAAGAATAGCCGTTCGCATATTAAGTCAGACATGCTCATCTTTTGCATGCGAGCATGATGGGAGCATGTATGATCAGATATATAGCAAAAGAAAAAATCGCCTATCACAGAAGAAACTTAATGACATTATGTACGTTCACTACAACTTGCGACTTAGAGAATGCCAAGTAAGAAAAAGGTCTAGGGAGTCAAAATCAACCTCTGCTGAGAATGTTCTACAAGAGCACTTACTTGGTGACTGGATAGTTGATACTACTGCACAAAGCTCTGACAGTGACAAGAATATCCCTTTTGGAGTTGAACTAGACGATGAATATGAAAATGATTCAGTAGACTATGACGATGGTTCTGAAAGGCATCTAAAGGGTTCCCATGAGCTGGTTACTATGGCTGATGGAGCAGTAGGATCTTCAGATGCAGATCATGCTAACATTGATGGTGCCAGTGACGATGAGTCGGATCTGAATTATTTTGATGATGATATGAGTGAGTAA 2706 0.3936 MAPIRSTGFVDPGWDHGIAQDERKKKVRCNYCGKVVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLKMKENLEGCRSNKKQKQVDAQAYMNFQSNDDEDDEEQVGCRSKGKQLMDGRNVSVNLTPLRSLGYVDPGWEHGVAQDERKKKVKCSYCEKVVSGGINRFKQHLARIPGEVAPCKSAPEEVYLKIKENMKWHRTGKRHRQPEAKDLMPFYPKSDNEDDEYEQQEDTLHHMNKEALIDIDRRYSKDTGKTFKGMSSNTSPEPALRRSRLDSFYLKHPTNQNLQTCKQLKVKTGPTKKLRKEVFSSICKFFCHAGIPLQAADSVYFHKMLELAGQYGQGLACPSSQLISGRFLQEEINSIKNYLAEYKASWAITGCSIMADSWRDAQGRTIINFLVSSPHGVYFVSSVDATNVVEDATYLFKLLDKVVEELGEENVVQVITENTPNYKAAGKMLEERRRNLFWTPCAIYCINQVLEDFLKIRCVEECMEKGQKITKLIYNQIWLLNLMKSEFTHGNELLKPAGTQCASSFATLQNLLDHRVSLRRMFLSNKWMSSRFSSSSQGKEVQKIVLNVTFWKKMQSVRNSVYPILQVFQKVSSGESLSMPYIYNDLYRAKLAIKSIHGDDARKYEPFWKVIDRHCNSLFCHPLYLAAYFLNPSYRYRQDFVSHSDVVRGLNECIVRLELDNMRRISASMQIPHYNSAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRIAVRILSQTCSSFACEHDGSMYDQIYSKRKNRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSAENVLQEHLLGDWIVDTTAQSSDSDKNIPFGVELDDEYENDSVDYDDGSERHLKGSHELVTMADGAVGSSDADHANIDGASDDESDLNYFDDDMSE* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1745 901 SUPERFAMILY Ribonuclease H-like 370 789 IPR012337 -
Mtr2g1745 901 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Mtr2g1745 901 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Mtr2g1745 901 Coils Coil 218 238 - -
Mtr2g1745 901 MobiDBLite consensus disorder prediction 871 901 - -
Mtr2g1745 901 MobiDBLite consensus disorder prediction 198 222 - -
Mtr2g1745 901 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Mtr2g1745 901 PANTHER OSJNBA0013A04.12 PROTEIN 46 839 - -
Mtr2g1745 901 PANTHER OSJNBA0013A04.12 PROTEIN 11 48 - -
Mtr2g1745 901 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Mtr2g1745 901 Pfam Protein of unknown function (DUF 659) 346 497 IPR007021 -
Mtr2g1745 901 Pfam hAT family C-terminal dimerisation region 716 787 IPR008906 GO:0046983
Mtr2g1745 901 MobiDBLite consensus disorder prediction 203 222 - -
Mtr2g1745 901 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 48 - -
Mtr2g1745 901 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 46 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1745 Mtr-Chr2 19979213 19985470 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1745 - - gmx:100814604 1583.54