Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1621 ATGGCTTCGGTGTATATACCGGTTCAGAATTCCGAAGAGGAAGTTAGGGTTAATCTCGATCAACTTCCAAGGGATGCTTCTGATATTCTTGATATTCTCAAAGCTGAACAAGCTCCTCTCGATCTTTGGCTCATTATCGCGAGGGAGTACTTCAAGCAGGGAAAAGTTGATCAGTTTCGCCAGATTTTGGAGGAAGGAGCTAGTCCAGAAATTGATGAGTATTATGCTGATATTAGATATGAGAGGATTGCTATCTTAAATGCCCTCGGGGCTTACTATAGCTACCTTGGAAAAATAGAGACAAAACAAAGAGAAAAGGAGGAGCATTTCATTTTGGCAACACAATATTACAATAAAGCATCAAGGATAGACATGCACGAGCCCTCTACTTGGGTTGGAAAAGGTCAGCTTTTGTTAGCAAAGGGTGAAGTTGAACAGGCATCTGCTGCATTTAAGATTGTGTTAGATGGAGATCGTGACAATGTTCCTGCTCTTCTAGGCCAGGCATGTGTTGAGTTCAACCGTGGAAGATTTTCTGATTCGCTTGAGTTGTATAAGAGGGCATTGCAAGTGTTTCCCAATTGCCCTGCAGCTGTGAGACTTGGAATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCCCGACAGGCATTTGAGCGTGTTTTGCAGCTTGATCCAGAAAATGTCGAGGCTCTTGTTGCACTTGCAATAATGGACTTGCGCGCTAACGAAGCTGTTGGAATTAGGAAAGGAATGGTAAAAATGCAGAGGGCATTTGAGCTATACCCGTACTGTGCAATGGCTCTGAATTATCTTGCAAATCATTTCTTCTTCACTGGTCAACATTTTTTGGTTGAGCAACTGACTGAAACTGCATTAGCTGTTACCAATCATGGTCCAACCAAGTCTCATTCTTATTACAATTTAGCACGCTCTTACCATAGCAAGGGGGACTATGATAAAGCTGGGGTGTATTACATGGCATCTGTCAAGGAAATTAGCAAGCCCCATGAATTTGTGTTTCCTTATTATGGTTTGGGACAAGTACAGATTAAGTTGGGCGATTTTAGAAGTGCACTCTCAAACTTTGAAAAGGTTTTGGAGGTGTACCCAGATAATTGCGAGACATTGAAAGCACTTGCATACATATATGTTCAGCTTGGTCAGACCGACAAGGGCCATGAATTCATTAGGAAAGCTACAAAAATTGATCCCCGTGATGCCCAGGCATTTCTTGAATTGGGAGAATTGTTAATTTTGTCCGACACAGGAGCTGCACTGGATGCATTCAAAACTGCTCGTACTCTTTTTAAGAAGGGAGGTGAGGATGTACCAATTGAATTACTCAATAATATTGGTGTCCTTCAGTTTGAAAGGGGAGAATTTGAGCTTGCTAAACAAACTTTTAAGGAAGCTCTTGGTGATGGAATTTGGCTTTCTTTCTTTAGCGAGGCAAATAAAACTTCCATTGATGCTGCTACTTCTACACTTCAATTCAAGGACATGCAACTATTTCACGACCTTGAAAGTAACGGTCACCATGTTGAAGTACCATGGGATAAAGTCACAGTACTCTTTAACCTGGCCAGATTACTTGAGCAATTAAATGAATCTGGAACTGCAAGTGTATTATATCGCCTAATCTTGTTCAAGTACCCAGACTACATTGATGCGTATCTGAGGCTAGCTGCTATTGCAAAGGCTCGGAACAACATTCTATTAAGCATTGAATTGGTTAATGATGCCCTGAAGGTGGATGTCAAGTGTCCAAATGCATTATCTATGCTGGGTGAGTTGGAGTTGAAAAATGATGATTGGGTGAAGGCAAAAGAAACTCTCCGGAGAGCGAGTGATGCCACTGACGGGAAGGACTCGTATGCTACACTTTCTCTCGGAAACTGGAACTACTTCGCTGCAGTTCGGAATGAAAAGAGAAATCCAAAGCTAGAAGCTACTCATTTGGAAAAGGCCAAGGAGCTTTATACAAGAGTTATGATTCAGCATTCTGCTAATTTATATGCTGCCAATGGTGCTGCGGTTGTTTTTGCGGAGAAAGGCCATTTTGATGTTTCAAAAGATATCTTTGCACAGGTTCAAGAAGCTGCCAGTGGTAGCGTTTTTGTCCAGATGCCTGACGTTTGGATAAATCTGGCACATGTTTATTTTGCTCAGGGAAATTTTGCTTTGGCCGTCAAAATGTATCAGAATTGCTTGCGGAAGTTTTATCATAACACAGACTCACAAATACTTCTATACCTGGCTCGCACCCATTATGAAGCGGAACAGTGGCAAGACTGTATTAAAACTCTACAGAGAGCCATCCATTTGGCACCCTCAAACTACACATTAAGGTTTGATGCAGGGGTTGCAATGCAAAAGTTTTCAGCATCAACCCTTCAAAAGGCAAAGAGGACTGCAGATGAGGTGAGAGCAACGGTTGCAGGGCTGCAAAATGCTGTTCGTATATTTAGTCAGTTGTCTGCTGCTTCCAACCTACATATTCATGGATTTGATGAGAAGAAGATTGACACTCATGTTGGATACTGCACCCACTTACTTTCGGCTGCAAAAGTTCATCTTGAAGCAGCTGAACGTGAAGAACAACAAATACGGCAGAGACAGGAACTTGCTCGTCAGGTTGCATTGGCTGAGGAAGCCCGGCGCAAGGCTGAAGAGCAAAGGAAGATTCAGATGGACAGAAGAAAGCATGAGGACGAATTGAAAATAGTGCAACAACAGGAGGAAAATTTTAAGCGTGTTAAGGAACAATGGAAGAGCAGCACACATTCAAAACGGAGGGAAAGGTCCGATGATGAAGACGGTGGGACTGCTGAGAAAAAGAGAAGAAAGGGTGGAAAGAGGAGGAAGAAGGATAAACACTCAAAATCACACAATGACACAGAAGAAGCAGAGGCTGATATGATGGATGAACAAGAAATGGAGGATGAAGATGTTGACATGAACTCCAGAGAGGAGCCCCAAACTCAGATGAATGATGATGAGGAAAATCCCCACGGTCTTCTGGCATTAGCTGGACTTGAGGATTCTGATGCAGATGATGAGCCGGCTGGACCTCCCTCAACCATTAGCAGGCGGAGGCAGGCATTATCAGAATCCGACGACGATCAGCCAATAATGAGGCAAACGAGTCCTGTAAGAGAACAGTCTGTTGATATGGAGGAGAGTGATGGAGAAATCAGGGATGAGAAGAGACATGAAGATGATGGCAGTGATGAGGAGAAATAA 3252 0.4284 MASVYIPVQNSEEEVRVNLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFRQILEEGASPEIDEYYADIRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRFSDSLELYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIMDLRANEAVGIRKGMVKMQRAFELYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRSALSNFEKVLEVYPDNCETLKALAYIYVQLGQTDKGHEFIRKATKIDPRDAQAFLELGELLILSDTGAALDAFKTARTLFKKGGEDVPIELLNNIGVLQFERGEFELAKQTFKEALGDGIWLSFFSEANKTSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNESGTASVLYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVDVKCPNALSMLGELELKNDDWVKAKETLRRASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVMIQHSANLYAANGAAVVFAEKGHFDVSKDIFAQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLQRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAGLQNAVRIFSQLSAASNLHIHGFDEKKIDTHVGYCTHLLSAAKVHLEAAEREEQQIRQRQELARQVALAEEARRKAEEQRKIQMDRRKHEDELKIVQQQEENFKRVKEQWKSSTHSKRRERSDDEDGGTAEKKRRKGGKRRKKDKHSKSHNDTEEAEADMMDEQEMEDEDVDMNSREEPQTQMNDDEENPHGLLALAGLEDSDADDEPAGPPSTISRRRQALSESDDDQPIMRQTSPVREQSVDMEESDGEIRDEKRHEDDGSDEEK* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1621 1083 Coils Coil 801 821 - -
Mtr2g1621 1083 SUPERFAMILY TPR-like 115 243 IPR011990 GO:0005515
Mtr2g1621 1083 Gene3D Tetratricopeptide repeat domain 8 333 IPR011990 GO:0005515
Mtr2g1621 1083 MobiDBLite consensus disorder prediction 972 990 - -
Mtr2g1621 1083 ProSiteProfiles TPR repeat region circular profile. 342 375 - -
Mtr2g1621 1083 MobiDBLite consensus disorder prediction 920 1083 - -
Mtr2g1621 1083 Pfam Tetratricopeptide repeat 306 333 IPR019734 GO:0005515
Mtr2g1621 1083 ProSiteProfiles TPR repeat profile. 749 782 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 162 195 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 448 477 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 376 409 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 558 591 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 713 746 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 342 375 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 128 161 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 305 338 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 197 230 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 524 557 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 592 625 IPR019734 GO:0005515
Mtr2g1621 1083 SMART tpr_5 749 782 IPR019734 GO:0005515
Mtr2g1621 1083 Pfam Tetratricopeptide repeat 718 782 - -
Mtr2g1621 1083 Pfam Tetratricopeptide repeat 134 194 - -
Mtr2g1621 1083 ProSiteProfiles TPR repeat region circular profile. 197 230 - -
Mtr2g1621 1083 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Mtr2g1621 1083 Pfam Tetratricopeptide repeat 200 230 IPR001440 GO:0005515
Mtr2g1621 1083 Gene3D Tetratricopeptide repeat domain 648 835 IPR011990 GO:0005515
Mtr2g1621 1083 Gene3D Tetratricopeptide repeat domain 344 503 IPR011990 GO:0005515
Mtr2g1621 1083 Coils Coil 855 925 - -
Mtr2g1621 1083 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 1 1044 IPR031101 GO:0006355|GO:0016570
Mtr2g1621 1083 SUPERFAMILY HCP-like 203 435 - -
Mtr2g1621 1083 SUPERFAMILY TPR-like 525 793 IPR011990 GO:0005515
Mtr2g1621 1083 MobiDBLite consensus disorder prediction 1056 1083 - -
Mtr2g1621 1083 ProSiteProfiles TPR repeat profile. 342 375 IPR019734 GO:0005515
Mtr2g1621 1083 SUPERFAMILY TPR-like 653 740 IPR011990 GO:0005515
Mtr2g1621 1083 MobiDBLite consensus disorder prediction 920 949 - -
Mtr2g1621 1083 Pfam Tetratricopeptide repeat 354 412 - -
Mtr2g1621 1083 Gene3D Tetratricopeptide repeat domain 504 631 IPR011990 GO:0005515
Mtr2g1621 1083 ProSiteProfiles TPR repeat profile. 713 746 IPR019734 GO:0005515
Mtr2g1621 1083 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1621 156 408 EF-hand Containing Proteins AT1G05150 24.906 4.40e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1621 K15176 - gmx:100794371 1904.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1621 2 18279694 18297600 Mtr2g1621 2 18279694 18297600 ECH