Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1575 ATGGAGTGCGTTGGAGCGAGAAACTTAACGGCAATGGCGTTTTGCATAAGTCCTTCTTTGCGGTTAAGGAGAAAGAAGATTTGTTGGAGAAGAAGAGAAGTTTCATCGAACGTGATTCGGTTGCGTTCGATGAAAGTGAATGCGAAAGCAGGTGGTGCAGGAAGTGAGAGTTGCGTTGTTGCTAAAGAGGATTATGCTGATGAGGAGGATTTTGTTAAAGCTGGTGGTTCTGAACTTGTTTTTGTTCAAATGCAGCAGAAAAAGTCTATGGACTTGCAATCTAAGCTTGCGGATAAGTTGCCACCTATCTGTGTTGGAGATGGTATACTAGATCTAGTTGTTATTGGTTGTGGTCCTGCTGGTCTTGCTCTAGCTGCTGAATCTGGCAAGTTAGGATTAAAAGTTGGACTTATTGGTCCGGATCTCCCTTTCACAAACAACTATGGTGTGTGGGAGGACGAATTTAAAGGTCTTGGACTTGAAGGTTGTATTGAGCATGTTTGGAAGGATACCGTTGTATATATTGATAATAAAAATCCCATTTCAATTGGACGTTCTTATGGCCGTGTCAGTCGGCATTTGCTTCACGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCATATCTTGGCTCAAAAGTAGAAAGGATTGTTGAGGCTAGCAATGGTCATAATCATGTTGTCTGTGAATATGATACTGTAGTGCCTTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAGGTTGGGGGTCCAAAGGTGTGTGTACAAACAGCTTATGGTGTGGAAGTTGAGGTTGAAAACAGTCCTTATGATCCAAACGTGATGGTTTTCATGGATTACAGAGACTATATGAAGAACAATGTTCAAAGTCTAGAAGCTAAATATCCAACATTTCTTTATGCAATGCCCATGTCCCGTTCAAAAGTGTTCTTTGAGGAAACATGTTTGGCGTCTAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTCTTATCAAGATTAAAGACAATGGGGATCAAAGTTACAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTACCAAACACAGAGCAGAAGAACCTTGCGTTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGCTACTCTGTTGTGAGATCGTTGTCAGAAGCTCCGCAATATGCTTCAGTAATTGCTACAATTTTGAATGACGGTACTGCAAGGGACATTGTTACTTATGGAAGAAGTAAGGAGAATCCATCCATGCGAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGACAGAGATCATTCTTTCTTTTTGGATTAGCACTAATTGTGCAGCTGGACATTGAAGGCACTAGAACATTCTTTCGTACTTTCTTCTGCTTACCTGAGTGGATGTGGCAAGGATTTCTTGGTTCTTCTCTGTCCTCGAAAGATCTTCTATTGTTTGCACTCTACATGTTCATAATAGCACCAAATAACTTAAGAATGTCTCTAGTCAGACATCTGCTTTCAGATCCTACAGGGTCAACTATGATAAAAACCTACTTGACGATATAG 1596 0.4148 MECVGARNLTAMAFCISPSLRLRRKKICWRRREVSSNVIRLRSMKVNAKAGGAGSESCVVAKEDYADEEDFVKAGGSELVFVQMQQKKSMDLQSKLADKLPPICVGDGILDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTVVYIDNKNPISIGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHNHVVCEYDTVVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVFMDYRDYMKNNVQSLEAKYPTFLYAMPMSRSKVFFEETCLASKDAMPFDLLKKKLLSRLKTMGIKVTKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIATILNDGTARDIVTYGRSKENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCLPEWMWQGFLGSSLSSKDLLLFALYMFIIAPNNLRMSLVRHLLSDPTGSTMIKTYLTI* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1575 531 PANTHER - 1 477 - -
Mtr2g1575 531 TIGRFAM carotene-cycl: lycopene cyclase family protein 111 511 IPR010108 GO:0016117|GO:0016705
Mtr2g1575 531 SUPERFAMILY FAD/NAD(P)-binding domain 110 504 IPR036188 -
Mtr2g1575 531 Pfam Lycopene cyclase protein 111 508 - -
Mtr2g1575 531 Gene3D - 110 435 IPR036188 -
Mtr2g1575 531 PANTHER BNAC09G53690D PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1575 Mtr-Chr2 17605690 17612871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1575 K06444 - gmx:100788180 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1575 2 17605690 17612871 Mtr2g1575 2 17605690 17612871 ECH