Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1543 ATGTTAATGGAGAGTTTTACAAGGAGGAGAAATTGTTACATATTGTTTTTGTGTTTTTTTGTTTGTTATGTCACAGCTTCTGTGACTTATGATCATAAAGCTATTGTGATTAATGGAAAGAGAAGAATTTTGATCTCTGGTTCTATCCATTATCCTAGAAGCACACCTCAGATGTGGCCAGATTTAATACAAAAGGCTAAAGATGGAGGTGTTGATGTGATTGAAACCTATGTATTTTGGAATGGACATGAACCTTCTCAAGGAAAATATTACTTTGAAGATAGATTTGACTTGGTTAAGTTCATCAAAGTGGTTCAACAAGCTGGACTTTATGTTCATTTGCGTATTGGTCCCTATGTTTGTGCTGAATGGAATTTTGGGGGATTTCCTGTTTGGCTAAAGTATGTACCAGGTGTTGCTTTCAGAACAGACAATGAGCCGTTCAAGGCGGCTATGCAAAAATTCACTACCAAGATTGTCAGTATTATGAAGTCAGAGAATTTGTTTCAAAGCCAAGGTGGTCCAATTATTTTGTCTCAGATTGAGAATGAGTATGGACCAGTGGAATGGGAAATTGGTGCACCTGGAAAATCTTACACCAAATGGTTTTCTCAAATGGCTGTAGGACTAAACACTGGTGTTCCATGGGTTATGTGTAAGCAAGAAGATGCTCCTGATCCAATTATTGATACCTGTAATGGATATTACTGTGAAAACTTCTCTCCCAACAAGAACTACAAACCAAAAATGTGGACAGAAAATTGGACTGGCTGGTACACTGATTTTGGTACTGCTGTCCCTTATAGACCAGCAGAAGACTTGGCATTCTCGGTTGCCAGATTCGTACAGAATCGCGGCTCATATGTTAACTACTATATGTACCATGGAGGAACTAATTTTGGAAGAACATCTTCTGGCCTTTTCATTGCCACGAGTTACGATTATGATGCTCCTATCGATGAATATGGACTTATAAGTGAACCAAAATGGGGGCATCTAAGAGATTTACATAAAGCAATAAAGCAATGCGAGTCAGCTTTAGTGTCTGTTGATCCGACAGTGTCATGGCCTGGAAAAAACCTTGAGGTACACCTTTACAAGACAAGCTTTGGTGCCTGTGCTGCATTCCTTGCAAACTACGACACTGGATCGTGGGCAAAAGTTGCATTTGGAAATGGCCACTACGACCTACCCCCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGAGGTTTTCAACACTGCAAAGGTTCGTGCACCAAGGGTCCATAGATCGATGACACCTGCGAACAGTGCGTTTAATTGGCAGTCTTACAATGAACAACCTGCCTTCTCCGGTGAAAGTGGTTCCTGGACAGCAAACGGACTTTTGGAGCAGCTCAGTCAGACTTGGGATAAGTCAGATTATTTGTGGTACATGACAGATGTCAACATCAGTCCTAATGAAGGTTTTATAAAGAATGGCCAAAATCCCGTTCTTACCGCCATGTCAGCTGGCCATGTTCTGCATGTTTTTATTAACGGTCAATTTTGGGGAACTGCGTATGGATCATTGGACAATCCTAAATTGACATTTAGCAACAGCGTGAAGTTGAGGGTTGGCAATAACAAGATTTCTCTACTTAGTGTTGCCGTCGGTCTTTCGAATGTTGGCGTGCACTATGAAAAATGGAATGTTGGTGTGTTAGGCCCAGTAACTTTGAAGGGTCTAAACGAGGGGACACGAGATTTGTCTAAACAAAAATGGTCTTACAAGATTGGACTGAAAGGTGAATCCTTAAACCTTCATACCACAAGTGGAAGTTCTTCTGTTAAATGGACACAAGGATCATTTTTATCTAAAAAACAACCTTTGACATGGTACAAGACAACTTTCAACGCGCCGGCTGGAAACGATCCATTGGCTCTAGATATGAGTAGTATGGGAAAGGGTGAAATATGGGTTAATGGTCAGAGCATTGGTCGCCATTGGCCGGCATATATAGCTCGTGGTAATTGTGGCAGTTGTAATTATGCCGGAACTTTCACAGATAAAAAATGCAGAACAAATTGTGGACAACCCACACAAAAATGGTATCATATTCCTCGATCATGGCTGAACCCAAGCGGGAACGTCTTGGTTGTGTTGGAAGAATGGGGAGGCGACCCTACCGGAATTTCACTGGTGAAAAGAACATGA 2181 0.4127 MLMESFTRRRNCYILFLCFFVCYVTASVTYDHKAIVINGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGVDVIETYVFWNGHEPSQGKYYFEDRFDLVKFIKVVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGVAFRTDNEPFKAAMQKFTTKIVSIMKSENLFQSQGGPIILSQIENEYGPVEWEIGAPGKSYTKWFSQMAVGLNTGVPWVMCKQEDAPDPIIDTCNGYYCENFSPNKNYKPKMWTENWTGWYTDFGTAVPYRPAEDLAFSVARFVQNRGSYVNYYMYHGGTNFGRTSSGLFIATSYDYDAPIDEYGLISEPKWGHLRDLHKAIKQCESALVSVDPTVSWPGKNLEVHLYKTSFGACAAFLANYDTGSWAKVAFGNGHYDLPPWSISILPDCKTEVFNTAKVRAPRVHRSMTPANSAFNWQSYNEQPAFSGESGSWTANGLLEQLSQTWDKSDYLWYMTDVNISPNEGFIKNGQNPVLTAMSAGHVLHVFINGQFWGTAYGSLDNPKLTFSNSVKLRVGNNKISLLSVAVGLSNVGVHYEKWNVGVLGPVTLKGLNEGTRDLSKQKWSYKIGLKGESLNLHTTSGSSSVKWTQGSFLSKKQPLTWYKTTFNAPAGNDPLALDMSSMGKGEIWVNGQSIGRHWPAYIARGNCGSCNYAGTFTDKKCRTNCGQPTQKWYHIPRSWLNPSGNVLVVLEEWGGDPTGISLVKRT* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Mtr2g1543 726 PANTHER BETA-GALACTOSIDASE 10 726 - -
Mtr2g1543 726 Gene3D Glycosidases 22 343 - -
Mtr2g1543 726 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Mtr2g1543 726 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Mtr2g1543 726 SUPERFAMILY Galactose-binding domain-like 582 722 IPR008979 -
Mtr2g1543 726 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Mtr2g1543 726 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Mtr2g1543 726 Gene3D - 580 726 - -
Mtr2g1543 726 Gene3D - 455 579 - -
Mtr2g1543 726 SUPERFAMILY Galactose-binding domain-like 402 572 IPR008979 -
Mtr2g1543 726 PANTHER BETA-GALACTOSIDASE RELATED 10 726 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1543 Mtr-Chr2 17157270 17163667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1543 8 726 Glycoside Hydrolase AT5G56870 70.499 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1543 - - gmx:100810170 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1543 2 17157270 17163667 Mtr2g1543 2 17157270 17163667 ECH