Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1525 ATGGCCAAACCAATAGTAGACTTCACAGTACAAAAAATCAATGATTTACTCATTGATGAAGCTTTGTTCTTATATGGAGTGAAAGACAAAGTGCAAAGTCTAAGAACTGAATTAAGGATGATGGAATCTTACTTACAAGATGCAGATAGAAAGCAAGATGAAGATGAATCTCTCAAGAATTGGATTTCAGAAATCAGAGAAGCTGCTTATGATTCAGATGATGTCATTGAAGCATATGCACTCAAAGAAGCTTCAAGAAGAAACATGACAGGTACCTTAAACAGAATCAAAAGGTTTGTTTCAATTATCAATAGGTTAATAGAAATTCATCAAGTAGGTTCACAAGTTGATGGTATCATTTCTAGGATAACTAGTCTTACAAAAAGTTTAAAAACTTTTGGCATAAAAAGTGAAATAGGAGAAGCATCAAGTTCAATACATGGGAGAAACAAAGCTTTGAGAAGATCTTACTCTCATGTTATTGAAGAGGATATAATTGGTGTTGAAAATGATGTTAATATTTTGGAGTCATATTTGGTTGATAACAACAATAAGGGGTGCAAAATTGTTGCTATTTGGGGTATGGGAGGTTTAGGAAAAACAACATTGGCTAAGAAAGTATATCATAGTACTAAAGTTAGGCAAAATTTTGAGAGCTTAGCTTGGGCTTATATATCACAACATTGTCAAGCAAGGGATGTTTGGGAAGGAATTTTGTTGAAGCTTTTATCTCCTTCTAAAGAGTTAAGAGAAGAACTCGTGAGTATGAAAGACGAGGAAGTTGCGAAAAAGCTTTATCAAGTTCAAGTGGAGAAGAAGTGTTTGGTAGTTCTTGATGATATTTGGAGTGTAGGTACTTGGAATAATCTGAGTCCTGGTTTTCCAAATGAGAGATCATTGTCTGTTGTTGGTAGTAAAATATTGCTTACCACCAGGAATACTGACGTTGCATTGCATATGGATTCTACTTGTTATCGTCATGAACTGAGTTGCTTGAATGAAGATGATAGCTGGGAGTGTTTCCTGAAAAAGGCATGCCCAAAACATGATGATCCAGATCCAGACTCTAGAATCAGCACAGAGATGGAGAAATTGGGAAGAGAAATGGTTGGAAGATGTGGAGGTTTACCTCTAGCCATAATTGTCCTTGGAGGACTACTAGCATCAAAGCCAACATTTTATGAATGGGACACAGTGAGACAGAACATCAATTCATACCTAAGAAAAGCAAAAGGCAAAGAACAACTTCTAGGAGTATCTGAAGTACTAGCTTTGAGCTATTATGAATTGCCTTACCAATTAAAACCATGTTTCCTACACTTAGCACATTTTCCCGAAAACCTAGAGATACAAACCAAGAAACTCATAAGAACATGGGTGGCAGAAGGTATCATATCATCGGTTCAAAACGCTGGAGATGGTGAGGAAGCTCTCGAGGACGTGGCACAACGTTACTTGACTGAACTCATCGAAAGGTGTATGATTCAGGTGGTTGAAAAGAGTTCAACAGGAAGGATTAGAACAGTTCAAATGCATAATCTCATGAGGGACCTATGTGTGTCTAAGGCATATGAAGAGAACTTTCTTGAAATTATTGATTCGAGGAATGCAGATCAAACTAGTACCTCAAAAGCAAGACCGATTGGTAAAGTTCGACGGATCGTGTTATATCTTGATCAAGATGTTGATAGATTCTTCCCTAGACATTTAAAAAGCCATCACCATCTTAGGTCTATACTTTGCTACCATGAAAAAACAGCTAGGTTAAGTGAATGGAGTTTGATGAAATCAGTTTTCAAAAAGTGCAAGTTACTTAGAGTTTTGAATTTGGAAGGAATTCAATGTCAAATGGGGAAATTACCAAAAGAAATTGGTTTTTTGATCCATTTAAGGTTTCTAAGTCTAAGAAACACAAAAATTGATGAATTGCCAAATTCAATAGGAAATTTAAAGTGCTTGCAAACCCTAGACCTTCTCACAGGAAATTCAACAGTTCAAATACCAAATGTCATAGGAAACATGGAAAAATTGAGACATTTATATCTACCTGAATCATGTGGCAATGGCATTGAAAAATGGCAACTATCCAATCTGAAAAACTTGCAAACTTTGGTTAACTTCCCTGCTGAGAAATGTGATGTAAAAGATCTCATGAAACTAACCAGTTTAAGAAAATTGGTAATAGATGATCCTAATTATGGAGATATCTTTAAAAGTACTAATGTAACCTTTAACCACCTCGAGTCATTGTTTTACGTTAGTTCTGAGGATATATCAATCCTTGAAGTTTCTGCAGGGTGTCCTAATCTCTACAAGCTACACATAGAAGGGCCAATAAGTAATCTTCCACAACCAAACCAAATTTCATCAAAACTTGCTAAACTCAAATTACAAGGTTCTGGACTTGTTGCCGATCCAATGACAACATTGGAGAAGCTACCAAATTTAAGGTTGCTTGAGTTACAGCTTGATTCATTTTTAGGAAAGCAAATGGTTTGTTCAAGCAAAGGTTTTCCTCAGTTAAGGTCACTTGTTTTGAGTGATTTGTCTAATCTTGAACAGTGGAAGGTTGAGAAAGGTGCTATGTGTTGTCTTGGGAAGCTTGAGATTTCAAATTGTACTAAGCTTGAGGTTGTTCCAGAAGAGATTAGGTTTGTAAGTAGTCTTAAGGATTTGGAGATTAGATCAATGTTTGCTGCATTTAGAATTAAACTTGAGAAAGGTGGTGATGAACATTACAAAGTTCAACATGTTCCATCTTTGGTATTTCGTTACTGTGACTATTAG 2787 0.3595 MAKPIVDFTVQKINDLLIDEALFLYGVKDKVQSLRTELRMMESYLQDADRKQDEDESLKNWISEIREAAYDSDDVIEAYALKEASRRNMTGTLNRIKRFVSIINRLIEIHQVGSQVDGIISRITSLTKSLKTFGIKSEIGEASSSIHGRNKALRRSYSHVIEEDIIGVENDVNILESYLVDNNNKGCKIVAIWGMGGLGKTTLAKKVYHSTKVRQNFESLAWAYISQHCQARDVWEGILLKLLSPSKELREELVSMKDEEVAKKLYQVQVEKKCLVVLDDIWSVGTWNNLSPGFPNERSLSVVGSKILLTTRNTDVALHMDSTCYRHELSCLNEDDSWECFLKKACPKHDDPDPDSRISTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINSYLRKAKGKEQLLGVSEVLALSYYELPYQLKPCFLHLAHFPENLEIQTKKLIRTWVAEGIISSVQNAGDGEEALEDVAQRYLTELIERCMIQVVEKSSTGRIRTVQMHNLMRDLCVSKAYEENFLEIIDSRNADQTSTSKARPIGKVRRIVLYLDQDVDRFFPRHLKSHHHLRSILCYHEKTARLSEWSLMKSVFKKCKLLRVLNLEGIQCQMGKLPKEIGFLIHLRFLSLRNTKIDELPNSIGNLKCLQTLDLLTGNSTVQIPNVIGNMEKLRHLYLPESCGNGIEKWQLSNLKNLQTLVNFPAEKCDVKDLMKLTSLRKLVIDDPNYGDIFKSTNVTFNHLESLFYVSSEDISILEVSAGCPNLYKLHIEGPISNLPQPNQISSKLAKLKLQGSGLVADPMTTLEKLPNLRLLELQLDSFLGKQMVCSSKGFPQLRSLVLSDLSNLEQWKVEKGAMCCLGKLEISNCTKLEVVPEEIRFVSSLKDLEIRSMFAAFRIKLEKGGDEHYKVQHVPSLVFRYCDY* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1525 928 Gene3D Ribonuclease Inhibitor 538 911 IPR032675 -
Mtr2g1525 928 Gene3D - 5 113 - -
Mtr2g1525 928 Pfam NB-ARC domain 169 427 IPR002182 GO:0043531
Mtr2g1525 928 PANTHER OS09G0479500 PROTEIN 19 913 - -
Mtr2g1525 928 Gene3D - 426 523 IPR036388 -
Mtr2g1525 928 SUPERFAMILY L domain-like 510 896 - -
Mtr2g1525 928 Gene3D - 151 326 IPR027417 -
Mtr2g1525 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 441 IPR027417 -
Mtr2g1525 928 PANTHER DISEASE RESISTANCE PROTEIN RP 19 913 IPR044974 GO:0006952
Mtr2g1525 928 Coils Coil 31 51 - -
Mtr2g1525 928 Gene3D - 331 425 IPR042197 -
Mtr2g1525 928 PRINTS Disease resistance protein signature 189 204 - -
Mtr2g1525 928 PRINTS Disease resistance protein signature 268 282 - -
Mtr2g1525 928 PRINTS Disease resistance protein signature 373 387 - -
Mtr2g1525 928 PRINTS Disease resistance protein signature 811 827 - -
Mtr2g1525 928 CDD RX-CC_like 2 128 IPR038005 -
Mtr2g1525 928 Pfam Rx N-terminal domain 6 88 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1525 Mtr-Chr2 16912897 16917309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1525 570 688 Receptor kinase-like Gene Family AT5G27060 34.559 3.79e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1525 - - gmx:100305356 1338.94