Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1457 ATGGAACAACCTCCTTCCGATCCTCCGGTCACCGCCCCCGCAGCGAGCGAAACCATAAGCAAAAATGCACTGAAGCGTGAACAAAAGAAAAGGGAGAGAGAAGAAGAAAAGAGGAAAAAGGACGAGGAAAAAGCCAGAAGGGCTGCTGAAATGAGAAGTGCCCAAGAGAACAGACCTGCAGCTGCTGATGAGGAAGATATGGATCCAACGCAATACTTGGAGAACAGGCTCAAGTATCTTTCTACTGAAAAGGAAGAAGGGAGAAACCCATATCCACACAAATTCTCTGCCACTATGACTATTAAACAATATATCAAGGAATATGAAGGTTTAAGTGATGGGCAACATCTTGACGATGTTTCTGTGTCTTTGACTGGCAAAATCATGCACAAACGTTCCTCTGGTGCAAAGCTCGTCTTTTATGACCTTCATGATGATGGTTTCAAGGTTCAGGTTATGGCCGATGCAAGTAAATCGGACTTAAATGAGGCTGGGTTTGACAAAGTCCATTCTAATGTGAAGCGTGGTGATATTGTTGGCATCACAGGGTTTCCAGGCAAAAGCAGGAAGGGAGAGCTTAGTATTTTCCCCAAAACTTTTGTGGTGCTGTCTCATTGTCTGCATATGATGCCTAGGCAAAAATCTGCTGCTGCTGCTGCTGCTGATAACGCATGGCTACCAGGAAAGACCAGGAATCCCGAAGCATACACTCTGAAAGACCAGGAAACTAGATATCGGTTACGCCATTTGGATTTGATGCTTAATACAGAGGTTCGAGAAATATTCAGGACTAGGTCTAAAATCATTTCTTACGTTAGGAGTTTTCTGGACAAGCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCTGGTGGTGCTGCTGCTCGGCCATTTGTAACTCATCATAATGACCTTAACATGAGATTATTCATGAGAATTGCTCCAGAACTCTATCTCAAGAAGTTGGTTGTTGGTGGTCTGAACCGTGTTTATGAAATTGGTAAACAATTTAGGAATGAGGGCATAGATTTGACTCATAATCCTGAATTTACTACCTGTGAGTTCTATATGGCTTACAAGGACTACTACGACTTAATGGAGATAACAGAGAACATGTTGAGCGGTATGGTGTATGAACTTACAAAAGGCAGCTATAAAATCAAGTATCATGCAGATGGTCTTGACAAGGATCCTATTGAAATCGACTTTACTCCACCATTCAGAAGGATTGACATGATTGAAGGACTAGAGGAGATGGCAGGCCTCAGTATTCCTAAAGACTTGACGAGTGCTGAAGCTAATCAATATCTAAGGGATGCCTGCTTGAAGTACGAAATCAAATGTCCCCCTCCTGAAACAACTGCACGTTTGTTGGATAAGCTTGTGGGGCACTTTTTGGAGGAAACATGTGTCAATCCTACATTCATCATAAACCACCCAGAGATAATGAGTCCTTTGGCGAAGTGGCACAGAACAAAACCAGGCCTGACTGAACGTTTTGAATTGTTTATCAACAAACATGAGCTTGCTAACGCGTATACTGAATTGAATGACCCTGTGGTACAACGGCAAAGATTTGCTGATCAACTCAAGGATCGGCAATCAGGTGACGACGAAGCAATGGCCTTGGACGAAACATTTTGCACGGCTTTGGAGTATGGTTTGCCACCAACTGCTGGTTGGGGTTTGGGTATTGATCGGTTGACTATGTTATTGACTGATTCACAAAATATCAAGGAGGTTCTTCTCTTCCCTGCCATGAAACCTCAAGATGTCGTGTCCCAATTAAATCATTTACAGGTATAA 1815 0.4281 MEQPPSDPPVTAPAASETISKNALKREQKKREREEEKRKKDEEKARRAAEMRSAQENRPAAADEEDMDPTQYLENRLKYLSTEKEEGRNPYPHKFSATMTIKQYIKEYEGLSDGQHLDDVSVSLTGKIMHKRSSGAKLVFYDLHDDGFKVQVMADASKSDLNEAGFDKVHSNVKRGDIVGITGFPGKSRKGELSIFPKTFVVLSHCLHMMPRQKSAAAAAADNAWLPGKTRNPEAYTLKDQETRYRLRHLDLMLNTEVREIFRTRSKIISYVRSFLDKLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKKLVVGGLNRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYKDYYDLMEITENMLSGMVYELTKGSYKIKYHADGLDKDPIEIDFTPPFRRIDMIEGLEEMAGLSIPKDLTSAEANQYLRDACLKYEIKCPPPETTARLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRTKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQDVVSQLNHLQV* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1457 604 Gene3D Bira Bifunctional Protein; Domain 2 236 602 IPR045864 -
Mtr2g1457 604 PRINTS Lysyl-tRNA synthetase signature 277 287 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mtr2g1457 604 PRINTS Lysyl-tRNA synthetase signature 293 309 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mtr2g1457 604 PRINTS Lysyl-tRNA synthetase signature 322 335 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mtr2g1457 604 PRINTS Lysyl-tRNA synthetase signature 340 357 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mtr2g1457 604 PRINTS Lysyl-tRNA synthetase signature 475 491 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mtr2g1457 604 MobiDBLite consensus disorder prediction 22 71 - -
Mtr2g1457 604 CDD LysRS_core 255 592 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mtr2g1457 604 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 262 592 IPR006195 -
Mtr2g1457 604 Pfam OB-fold nucleic acid binding domain 122 199 IPR004365 GO:0003676
Mtr2g1457 604 PANTHER LYSINE--TRNA LIGASE 17 595 - -
Mtr2g1457 604 Hamap Lysine--tRNA ligase [lysS]. 75 593 IPR002313 GO:0004824|GO:0005524|GO:0006430
Mtr2g1457 604 Coils Coil 24 52 - -
Mtr2g1457 604 CDD LysRS_N 121 252 IPR044136 GO:0000166
Mtr2g1457 604 PIRSF LysRS2 10 603 IPR034762 GO:0004824|GO:0005524|GO:0006430
Mtr2g1457 604 Gene3D - 63 211 IPR012340 -
Mtr2g1457 604 SUPERFAMILY Nucleic acid-binding proteins 67 211 IPR012340 -
Mtr2g1457 604 TIGRFAM lysS_bact: lysine--tRNA ligase 232 593 IPR002313 GO:0004824|GO:0005524|GO:0006430
Mtr2g1457 604 SUPERFAMILY Class II aaRS and biotin synthetases 240 591 IPR045864 -
Mtr2g1457 604 PANTHER LYSYL-TRNA SYNTHETASE 17 595 - -
Mtr2g1457 604 MobiDBLite consensus disorder prediction 1 71 - -
Mtr2g1457 604 Pfam tRNA synthetases class II (D, K and N) 240 590 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1457 Mtr-Chr2 15965847 15973743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1457 K04567 - gmx:100785660 993.416