Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1440 ATGTCTAAAATCTTCAGGGAATACATTGGTGTGAAACCATTCTCAACAAATTTAAGGGATTTTCCAGTTGAAATAATCAAAACCAATATCTCAGAATTCCACTTCATTTTGGGATTTGCCACTGAGGAGTATGACGCTCAAAATAAAGGCACAGGAGTTTTCAAGGAAACTTGGAATACTAGAGCATTCGGTCCAGAAGCAGTGAGAAATTTGAAGGGAAATAATCCAAATGTGAAGGTGGTAATAAGCATTGGAGGTAATGACACCGTTAAAACTCCATTCAATCCTGTTGAGGAAACTATCTGGATTACGCGGGCTGTGTCTTCACTCAAAGTGATCATCCAAAAATACAAGGATCAAACCGGCAACATAATTGATGGCATTGACATTAATTATCTTAACGTCTTCCATACTACAAATGACACAGGTAAGCTTCGTTTTGCCAGGTGCATAGGGGAAGTTATAACTCAACTTAAGAATGATAATTATCTACGCATCAAGATCGTGTCCATTGCTCCATCCGAGACCAATGAAATCCACTACCGCAACTTGTTTTGGCAAAATGAGGCCAATATAAATTGGGTTAACTACCAGTTCTACAACCAATCTAAAGCTGTATCCACACTTGACGACTTTCTAAAACTCTATGACCAGGTATCAAGAAACTACAAACCTAGTATAGTCCTTCCAGGAGTTAGCACCGACAAGCTTCACATTGAGCCTGTAGACAAGATGCCAAGGGAGCACTTCATTGCTGGCTGCAGACATCTCCTCCAGATAGCATCACTCCCTGGTGTTTTTCTTTGGAACGCTGATGACTCTACAATTCCTCTACCCAATGAGAATAAACCTTTCGTTTTAGAGGATATTTTGCAAAGCCTCCTCATAGGTTAA 894 0.3993 MSKIFREYIGVKPFSTNLRDFPVEIIKTNISEFHFILGFATEEYDAQNKGTGVFKETWNTRAFGPEAVRNLKGNNPNVKVVISIGGNDTVKTPFNPVEETIWITRAVSSLKVIIQKYKDQTGNIIDGIDINYLNVFHTTNDTGKLRFARCIGEVITQLKNDNYLRIKIVSIAPSETNEIHYRNLFWQNEANINWVNYQFYNQSKAVSTLDDFLKLYDQVSRNYKPSIVLPGVSTDKLHIEPVDKMPREHFIAGCRHLLQIASLPGVFLWNADDSTIPLPNENKPFVLEDILQSLLIG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1440 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 3 297 IPR001223 GO:0005975
Mtr2g1440 297 PANTHER CHITINASE 2 2 295 - -
Mtr2g1440 297 Gene3D Glycosidases 2 297 - -
Mtr2g1440 297 Pfam Glycosyl hydrolases family 18 62 204 IPR001223 GO:0005975
Mtr2g1440 297 PANTHER CHITINASE 2-LIKE 2 295 - -
Mtr2g1440 297 SUPERFAMILY (Trans)glycosidases 17 277 IPR017853 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 2 15 IPR000677 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 25 44 IPR000677 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 51 66 IPR000677 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 68 86 IPR000677 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 110 132 IPR000677 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 190 213 IPR000677 -
Mtr2g1440 297 PRINTS 2-S globulin family signature 252 271 IPR000677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1440 Mtr-Chr2 15817284 15818552 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1440 - - mtr:MTR_0062s0020 377.867