Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1400 ATGAATGAACAAGATGACTCTGAAGTTGGCAAAAACGATAAACCTGTTCGTGTTTATGCTGATGGTATCTACGATCTCTTTCACTTTGGTCATGCCCGTTCTCTTGAACAAGCCAAGAAATCGTTTCCGAATACATATCTCCTTGTTGGATGCTGCAGTGATGAGATCACACACAAGTACAAGGGTAAAACTGTTATGAATGAGCAAGAACGCTACGAGTCTCTTCGTCATTGCAAGTGGGTTGATGAAGTTATTCCAGATGTGCCGTGGGTAATCAATCAGGAGTTCATTGACAAGCATAAAATTGACTATGTGGCACATGATGCTCTTCCTTATGCTGATACAAGTGGAGCTGGAAATGATGTCTATGAATTTGTTAAGGCTATTGGGAAATTTAAGGAAACAAAGCGGACTGAAGGAATTTCTACCTCTGATATCATAATGAGAATCATCAAAGATTATAATCAGTATGTAATGCGTAATCTGGATCGTGGTTATTCAAGAAAGGAGCTAGGTGTTAGCTATGTCAAGGAGAAAAGATTGAGAATGAACATGGGACTTAAAAAGTTGCAGGAGAGAGTCAAGAAACAGCAAGAGACTGTAGGAAAGAAGATAGGAACAGTGAGAAGAATTGCCGGGATGAACCGTACCGAATGGGTTGAAAATGCAGATCGATTAGTTGCTGGATTTCTCGAGATGTTTGAAGAAGGATGCCACAAAATGGGAACAGCAATCAGAGACAGAATTCAAGAACAGCTGAAGGCACAGCAGCTAAAATCTCTTCTTTATGACGAGTGGGATGATGATGTTGACGACGAATTCTACGAAGATGAATCTGTAGAATACTACAGCGACTAA 858 0.4021 MNEQDDSEVGKNDKPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDEITHKYKGKTVMNEQERYESLRHCKWVDEVIPDVPWVINQEFIDKHKIDYVAHDALPYADTSGAGNDVYEFVKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKELGVSYVKEKRLRMNMGLKKLQERVKKQQETVGKKIGTVRRIAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLKAQQLKSLLYDEWDDDVDDEFYEDESVEYYSD* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1400 285 CDD CCT 14 165 IPR041723 -
Mtr2g1400 285 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 3 283 - -
Mtr2g1400 285 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 17 84 IPR004821 GO:0003824|GO:0009058
Mtr2g1400 285 SUPERFAMILY Nucleotidylyl transferase 17 149 - -
Mtr2g1400 285 Gene3D HUPs 1 236 IPR014729 -
Mtr2g1400 285 PANTHER CYTIDYLYLTRANSFERASE 3 283 IPR045049 GO:0004105|GO:0006657
Mtr2g1400 285 Pfam Cytidylyltransferase-like 19 148 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1400 Mtr-Chr2 15248570 15253375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1400 42 277 Acyl Lipid Metabolism Gene Families AT2G32260 77.215 9.25e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1400 K00968 - gmx:100786249 469.159