Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1398 ATGTTTACCATGAGATTCTCAACCCTAGCATTTCTCTTATCACTTTTGGTGATACTACAAGTACAAGAAACCATTTGCTTCAATGAACACGTACAACTTTCTCATCTCATGAAAAAAATTGCTAAGCATAAAGTAGACATTGCCTTGTCACAACCACCCTCTCCTTCTCCTTCTCCTTCTCCATCACCATCTTCACACACAAAAAAGAGTGGAAGAGTGGTGTACCCAATTGAATATGGTGCAGATCCAACTGGAGTGAATGAAAGCAGTGATGCCATGATGAAAGCTGTAGAAGCTGCATTTGATATTGATAATTTAGGGCTTGAATTATTACTAGGAATTAGAGACCTTGGAGGTGTTATCATTGATTTTCAAGGTGGAAACTATAAAATCAGCAATCCCATCACATTTCCTTCATCTTCTGGCAATCTTGTGGTAAAAGGAGGAACCTTAAGAGCTTCCAATACATTTCCAACTGATAGATACCTTGTTGAGTTGTGTGCATCAAGTTCCAAAGTACTCCAAAATGCAACAACAGCATACAACAACAAATTACTTCAACAAACAATAGGAATTTACTATGAAGACATAACATTTAGAGATATCCTCTTTGATTCAAGCTACCGAGGTGGAGGAATATTCATCGTCGATTCAGCTAGAATCAGAATCGACAATTGTTTCTTCCTCCATTTCAACACAGAAGGAATTAAAGTTCAAAGTGGCCATGAAACCTTCATATCAAGTAGTTTTCTTGGACAACACTCAACAGTCGGTGGAGACAAAGGCGAAAGACAATTTTCTGGAACTGCAATTGATCTTGCTAGCAATGACAATGCTATCACCGATGTCGCAATTTTCTCAGCAGCCATTGGAATTGTTGTTAGGGGACAAGCTAACATAATCACAGGTGTGCATTGTTATAACAAAGCAACAGGTTTTGGTGGAATTGGAATTTTGTTGAAGTTAGCAGGGAATTCACAAACAAGAATTGATAATTGTTACATGGATTATAATAGTATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACTGATGGTTTTTTCTTAGGAGATGCTAATATTGTTTTGAAGTCAATTAAAGGGAAAGTTTATGGTTTAAATATTGTTAACAATATGTTTAGTGGAAACCCTAATAATAATGTTCCAATTGTAAAATTAGATGGGGGATTTAGTAACATTGATCAAGTGGTGATTGATAGGAACAATGTGATTGGTATGATTTTAAGATCAACGGTTGGGAAGTTAAGTGTGGATGGTAATGGCACAAAATGGGTGGGTGATTTTTCAAATGTTTTGGTGTTTCCTAATAGGATTAGTCATTTTCAGTATTCATTTCATACATTAGAAGGACCAAAGTTTGTTGCACATTCAGTGAGTAATGTGTCAAATAATGTTGTAGTTGTTGAAAGTGAGAAACCAGTTCATGGTGTTGTTTCCTACTTTGTTGAACAATGA 1476 0.3618 MFTMRFSTLAFLLSLLVILQVQETICFNEHVQLSHLMKKIAKHKVDIALSQPPSPSPSPSPSPSSHTKKSGRVVYPIEYGADPTGVNESSDAMMKAVEAAFDIDNLGLELLLGIRDLGGVIIDFQGGNYKISNPITFPSSSGNLVVKGGTLRASNTFPTDRYLVELCASSSKVLQNATTAYNNKLLQQTIGIYYEDITFRDILFDSSYRGGGIFIVDSARIRIDNCFFLHFNTEGIKVQSGHETFISSSFLGQHSTVGGDKGERQFSGTAIDLASNDNAITDVAIFSAAIGIVVRGQANIITGVHCYNKATGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTDGFFLGDANIVLKSIKGKVYGLNIVNNMFSGNPNNNVPIVKLDGGFSNIDQVVIDRNNVIGMILRSTVGKLSVDGNGTKWVGDFSNVLVFPNRISHFQYSFHTLEGPKFVAHSVSNVSNNVVVVESEKPVHGVVSYFVEQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1398 491 MobiDBLite consensus disorder prediction 48 69 - -
Mtr2g1398 491 SUPERFAMILY Pectin lyase-like 121 445 IPR011050 -
Mtr2g1398 491 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 4 491 - -
Mtr2g1398 491 PANTHER POLYGALACTURONASE QRT3 4 491 IPR039279 GO:0004650
Mtr2g1398 491 SUPERFAMILY Pectin lyase-like 72 247 IPR011050 -
Mtr2g1398 491 Gene3D - 77 482 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1398 Mtr-Chr2 15239090 15241792 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1398 - - gmx:100802482 672.544