Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1394 ATGATTTCTACTTTCATTTTCTTTCACTCGTTTCTCTTCTTGTATATCCTATCAACTCCTTCTTCATGTTCTTCTTTCCTTTCTGGAATTGAAACTGGAGATTTAGAAAAACGGGGTGATTTGTTTCCACAGATTCTAAGAGATGAGGCAGTGGCAAGGCTTGTTGAGCTTGGAAAGGTTAGCGATGCTAATGACTATCTAGAGAGGACATTTTTGAGTCCTGCGACCACGAGGGCAATAAATCTCATTCGAAAATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTCGAGTTGAGGGTGCAAATGCAAATGCAGAAGCTTTATTGGTTGGATCTCACATGGACACTGTTGTTGATGCTGGTAAATTTGATGGAGCTCTAGGAATAGTCTCTGCAATATCTGCATTGAAAGTTATGCATGTCAATGGAAAGCTGCAAAATCTAACGCGTCCTGTTGAGGTGATTGCATTTTGTGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGTAGCGGTGCTCTAGCTGGTATTTTACCTGCTACAACATTGGAGATACCTGATAAGAGGAATGTAACGGTAAAAGATGTTCTTAAAGAGAACTCGATAGAAGCTGCGGAGGAAATGTTTTTGCAGCTCAAGTATGATCCAAAATCTGTTTGGGGTTATGTCGAGCTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTTGTTAAAGGCATAGCTGGGCAGACAAGATTGAAGGTTACGGTTAGAGGCTCACAAGGTCATGCCGGAACTGTTCCAATGTCCATGCGCCAAGATCCTATGGTGGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCTGAAGAGTACCTTTCTTATGATGGTCGTTGCAGCGGTTCATCGATTAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCAGGCCAGGTTACATATACCGTGGATATACGAGCAATTGATGATCTTGGACGTGAGGCTGTTATCTATGATTTATCCAATCGAATTTATCAGATATGTGACAAGCGCTCAGTTTCCTGCGTTATTGAACACAAGCATGATGCAGGTGCCGTGATTTGTGATCCAGAACTAAGTTCACAGCTGAAGTCTGCAGCTTATTCTGCACTCAAGAGGATGGAGGGTGACATTCAAGATGAAGTACCGACATTAATGAGTGGAGCAGGGCATGATGCCATGGCAATGTCTCACTTAACAAAGGTGGGAATGCTGTTTGTGCGATGTCGCGGAGGCATAAGTCACTCTCCACAAGAGGATGTGCTAGACGATGATGTATGGGCGGCCGGTTTAGCAACCTTATCATTTCTGGAAAATCTATAA 1437 0.4287 MISTFIFFHSFLFLYILSTPSSCSSFLSGIETGDLEKRGDLFPQILRDEAVARLVELGKVSDANDYLERTFLSPATTRAINLIRKWMEDAGLRTWVDQMGNVHGRVEGANANAEALLVGSHMDTVVDAGKFDGALGIVSAISALKVMHVNGKLQNLTRPVEVIAFCDEEGVRFQTTFLGSGALAGILPATTLEIPDKRNVTVKDVLKENSIEAAEEMFLQLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSYDGRCSGSSIKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSNRIYQICDKRSVSCVIEHKHDAGAVICDPELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEDVLDDDVWAAGLATLSFLENL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1394 478 CDD M20_bAS 51 476 - -
Mtr2g1394 478 Pfam Peptidase dimerisation domain 257 368 IPR011650 -
Mtr2g1394 478 SUPERFAMILY Bacterial exopeptidase dimerisation domain 257 389 IPR036264 -
Mtr2g1394 478 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 51 471 IPR010158 GO:0016813
Mtr2g1394 478 PANTHER ALLANTOATE DEIMINASE-RELATED 39 472 - -
Mtr2g1394 478 Gene3D - 257 389 - -
Mtr2g1394 478 Gene3D Zn peptidases 60 468 - -
Mtr2g1394 478 Pfam Peptidase family M20/M25/M40 117 467 IPR002933 GO:0016787
Mtr2g1394 478 PANTHER ALLANTOATE DEIMINASE-RELATED 39 472 IPR010158 GO:0016813
Mtr2g1394 478 SUPERFAMILY Zn-dependent exopeptidases 42 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1394 Mtr-Chr2 15190979 15195621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1394 K02083 - gmx:100819399 820.846