Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1373 ATGAAACCTTGCATGGTTTTTCTCTTTGTCTTGTTCTTTCTTCATAGCTATGTTCAAGGACGTTTTGTGGTAGAGAAAAACAGCATAACGGTTCTATCACCACATAAACTAAGAGGTAAAAACGATGGTGCTATAGGAAACTTTGGTATTCCAAATTATGGAGGGTATATTGTAGGGTCACTTGTTTATCCTGAAAAAGGCTCTCATGGTTGTCAAGTCTTTGAAGGTGATAAGCCTTTCAAGTTTCAGTCTCATCGTCCTACTATTGTTCTTCTTGATCGTGGAGAGTGTTATTTTGCCTTAAAGGTATGGCATGCTCAACTAGCTGGAGCCGCAGCAGTTTTAGTGGCTGACAGCATTGATGAGTCACTGATAACTATGGATTCTCCTGAGGAGAGCACCGATGCCGAAGGCTACATAGAGAAGATTGTAATTCCATCAGTACTAGTAGAGAAATCCTTTGGTGATTCATTGAAAGAAGCTTTAAACAACAAAGATGAAGTTTTGCTAAGAATAGATTGGAGGGAATCGGTACCTCACCCTGACAATCGAGTGGAGTATGAGTTCTGGACCAACAGCAACGACGAATGTGGTGCACGTTGCGATGAACAGATGAATTTTGTGAAGAATTTCAAGGGTCATGCTCAGATTCTTGAGAGAGGTGGATATACACTGTTCACTCCACACTATATAACATGGTTTTGTCCAAAGCCATTTGTTGAAACCAGTCAGTGCAAGTCTCAATGTATAAACCACGGAAGATATTGTGCGCCGGATCCAGAGAAGGATTTTGCTGAGGGATATGAAGGGAAGGATATAGTGTATGAGAATTTGAGGCAGCTCTGTGTTCATAGAGTAGCGAACGAGACCGGCCGTTCGTGGGTTTGGTGGGATTATGTGACAGATTTTCATGTTAGATGTTCCATGAAGGAGAAAAAATACAGCAAAGATTGTGCTGAAGTTGTCATGAAATCATTAGATCTTCCACTTGACAAAATTAAGAAATGTGTTGGTGATCCTGAAGCTGATGTGGAGAATGAAGTGCTAAAGATTGAACAAACATCACAGATTGGAGGAGGATCTCGTGGCGATGTCACCATTTTGCCAACATTGGTTTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACATCTGTCTTGAAGGCTATATGTGCTGGATTTAAGGAGACTACTGAGCCTCAAGTCTGTTTAAGTGGAGATATTGAAACTAATGAGTGTCTTGAAAGAAATGGAGGATGCTGGGAAGACAGAAATGTTAATGTAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGCGAGTGTCCTGTTGTGAAAGGTGTTCAGTATAGGGGTGATGGTTATACGTCATGTGAAGCTTTTGGACCTGCAAGATGTTCTTTAAACAATGGAGGTTGTTGGTCAGAAACTAGAGATAAAATTACTTTCTCCGCTTGTTCAGAATCCAAGGTAAATGGTTGTCACTGCCCAGTTGGATTTGACGGAGACGGTAATAATAAATGTGAAGATGTTGATGAATGCAAGGAAAAAAGTGCTTGTCAGTGTGATGACTGCAGTTGTAAGAACACTTGGGGTAGTTATGATTGTAAGTGCAAAGGAGGTCTTCTATATATGAAGGAACAAGATATGTGTATTGAAAGAAGTGGATCAAAATTTGGAAAGGTCGTTGCCTTTGTGGTCATAGCAGTTGTTGTGGGAGCTGGTCTAGCTGGTTACGTGTTCTACAAGTATAGACTAAGGTCTTACATGGACTCGGAGATTATGGCTATTATGTCACAATACATGCCACTGGACCAGCAAAATAATGTAGTTCATGCTGAATCCGAGCCTTTACGACAAGGCAATGTGTAA 1875 0.4075 MKPCMVFLFVLFFLHSYVQGRFVVEKNSITVLSPHKLRGKNDGAIGNFGIPNYGGYIVGSLVYPEKGSHGCQVFEGDKPFKFQSHRPTIVLLDRGECYFALKVWHAQLAGAAAVLVADSIDESLITMDSPEESTDAEGYIEKIVIPSVLVEKSFGDSLKEALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVETSQCKSQCINHGRYCAPDPEKDFAEGYEGKDIVYENLRQLCVHRVANETGRSWVWWDYVTDFHVRCSMKEKKYSKDCAEVVMKSLDLPLDKIKKCVGDPEADVENEVLKIEQTSQIGGGSRGDVTILPTLVLNNVQYRGKLERTSVLKAICAGFKETTEPQVCLSGDIETNECLERNGGCWEDRNVNVTACKDTFRGRVCECPVVKGVQYRGDGYTSCEAFGPARCSLNNGGCWSETRDKITFSACSESKVNGCHCPVGFDGDGNNKCEDVDECKEKSACQCDDCSCKNTWGSYDCKCKGGLLYMKEQDMCIERSGSKFGKVVAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAESEPLRQGNV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1373 624 SUPERFAMILY PA domain 84 166 IPR046450 -
Mtr2g1373 624 SMART egfca_6 511 553 IPR001881 GO:0005509
Mtr2g1373 624 Pfam PA domain 59 158 IPR003137 -
Mtr2g1373 624 ProSitePatterns Calcium-binding EGF-like domain signature. 511 537 IPR018097 GO:0005509
Mtr2g1373 624 Gene3D Laminin 465 549 - -
Mtr2g1373 624 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 7 601 - -
Mtr2g1373 624 Gene3D - 19 181 - -
Mtr2g1373 624 Gene3D Laminin 404 460 - -
Mtr2g1373 624 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 7 601 - -
Mtr2g1373 624 CDD EGF_CA 511 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1373 Mtr-Chr2 15047485 15053303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1373 5 621 Miscellaneous Gene Families AT1G30900 70.178 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1373 - - gmx:100800382 1134.01