Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1370 ATGCCACCAGCACGAGAGCTTCCTGGGTTCTACTTTGACCCAGAGAAGAACAGGTATTTCCCCATCAAAGGTCCCATTCCTGGCTCTTCTTCTTCTAAGACCAAAATCATTACTCCAAGGCCTTCCCAACCCTCTTCCTCTCAGGAAAAGAATAGGAGTTCTTGCAGGAAGCTTAGAAACAGAACGTCTAAGCTGCTGCAGATTAGGGAGTTAGATGGTCGTCATGTCAATGCCTCACACTATTGCAAGTGTAACTTCACTGAGGAACTCCGGAAAATACAAACATCTCAGCCTGCCGTTTGGAAGTATCAGGGAACCAATAGGATTGGTATTAGTGCTTTGGAACACTTAAATGTTGATGTGCAGACAGCAGAGGGTAGATTTCGAACTGATGTTTTATTGAATGGCAGCATAAATGGCTCGCTGAGTTTTTCTGAAGTTGGAAGGATTGGGCAAAATTTCGATGATGGGGTAAAGTGGATGCCTGATTGTGTGAAGAGTCGTATTAAAGGGAAAACAGATGAGCATAACGAAGTCCCAGGGCCGCTTTTCAGACCTAATGGAGCTACACTGATTATGTCCTCCAGAATATCTTGTATAAGATTGGGTCCAAATGTATCCCCTCATGCTGCGAATGACAATCCAATTGTTGGAAATATATTATTTACTACGCTGGGATCAGAAACATCTGGTGGATCTGTTTATACCATCAGTCTTGTTGATCCAATAGATCTTGGACAAGGAATATTGAACACATGGAGCAGACTAGAGGAAATAACGTCTTTCAATAGTACCCTTTGGACAGCTGAATACGATTATATTAGACATCGGGCTATAATTGGTACTAATCAGGGAGGTGCTTCGGTGGATCTTCAAAGTGGGACAAGGTCATGGTTTTTACGTTGTAAAAGTGATGTTTTTGCACAACAGATTGTTGATTCAGGAAATGTGATTTTATGTGGACTCAGAAATGGGGCAGTTGTCTCGGTAGATTTTCGAGAGAAAAGATTGCTTTCTAGTAGACTTACTGAGCATAGGATATCATATGTATCTTCAAATAAGAAAGTTGGAAGTTTTAAAAAAGATTGGTTCAAGCTTCAAGGAAGCATATATCCTTCACATACCATTAAGATGCCTTCATCTATATCCAGTTTGGCATCACTTCAATTTGATGATCAGTACTTCTTGGCAAGCTCCATGGATGGATCGATAAGGCTATACGACCGTCGCATGGTCCAGAGGGGTGCGGTTCAATCTTATGAAGGGCACGTGAATTCCCATACTCAAATACAGCTCGGTGTTGACCCATATGAGAGATATGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGATATGGAGTATCAAGTCTGGTGAATTGCTTTTGGAGGATAAGTTCTCTAATTCAGTTCTCTCCACTGTGTGCTATCAAACATTTAATAAGTTTAAAGCAGAAGAAGAAAACCAATACACACATGACTCTTCTTTGGGTGCATGGCTTGGATCACATGAAGGACTATTCTATATGCACTGGTTATGA 1539 0.4139 MPPARELPGFYFDPEKNRYFPIKGPIPGSSSSKTKIITPRPSQPSSSQEKNRSSCRKLRNRTSKLLQIRELDGRHVNASHYCKCNFTEELRKIQTSQPAVWKYQGTNRIGISALEHLNVDVQTAEGRFRTDVLLNGSINGSLSFSEVGRIGQNFDDGVKWMPDCVKSRIKGKTDEHNEVPGPLFRPNGATLIMSSRISCIRLGPNVSPHAANDNPIVGNILFTTLGSETSGGSVYTISLVDPIDLGQGILNTWSRLEEITSFNSTLWTAEYDYIRHRAIIGTNQGGASVDLQSGTRSWFLRCKSDVFAQQIVDSGNVILCGLRNGAVVSVDFREKRLLSSRLTEHRISYVSSNKKVGSFKKDWFKLQGSIYPSHTIKMPSSISSLASLQFDDQYFLASSMDGSIRLYDRRMVQRGAVQSYEGHVNSHTQIQLGVDPYERYVMSGGEDCKLRIWSIKSGELLLEDKFSNSVLSTVCYQTFNKFKAEEENQYTHDSSLGAWLGSHEGLFYMHWL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1370 512 Gene3D - 230 505 IPR015943 GO:0005515
Mtr2g1370 512 MobiDBLite consensus disorder prediction 27 51 - -
Mtr2g1370 512 SUPERFAMILY WD40 repeat-like 252 475 IPR036322 GO:0005515
Mtr2g1370 512 Pfam WD domain, G-beta repeat 417 454 IPR001680 GO:0005515
Mtr2g1370 512 Pfam WD domain, G-beta repeat 372 408 IPR001680 GO:0005515
Mtr2g1370 512 PANTHER KATANIN P80 SUBUNIT 12 510 - -
Mtr2g1370 512 MobiDBLite consensus disorder prediction 1 59 - -
Mtr2g1370 512 SMART WD40_4 369 408 IPR001680 GO:0005515
Mtr2g1370 512 SMART WD40_4 413 454 IPR001680 GO:0005515
Mtr2g1370 512 ProSiteProfiles Trp-Asp (WD) repeats profile. 420 463 IPR001680 GO:0005515
Mtr2g1370 512 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 12 510 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1370 393 465 Miscellaneous Gene Families AT5G08390 30.137 7.25e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1370 K11799 - gmx:100798753 734.176