Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1310 ATGCCGCCACAGGGTAATGCCGCCGCCGCTGTTTACGATCAACCTGCCGGCGGCTCCCTGCAAAGTGCATCCACTGATGCCGGAGACGCTGTCATGGCGCGGTGGCTTCAGTCCGCCGGTTTGCAGCATTTAGGTTCTCCACTTGCTTCATCCGGTGTCGATCATCGCCTCTTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAAGAGAAGCAGAGGCTTTTCAAGTTAATGAGAAACCTCAATTTTAATGCGGAATCTGGTTCGGAGCTTTATACACCCAATACTCAAACTTTGGGTGGAGGGTCTGCATCGGATGGGTTCTATTCTCCTGAATTTAGAGGGGATTTTGGAGCCGGGCTTTTGGATCTTCATGCCATGGATGACACAGAGCTTCTGTCTGAGCATATGATTTCAGAATCTTTCGAACAATCACCCATCATACCAGGAGATACTAGAGTATTTGAAGATGATTTCTATCCAATTAATAGCAAGCTGGAAAAAGAAGCTGAAGTTGATGCATCAATTTCTTTACCTATGAATGAAAAAGAGAATAGTACAAGGGAGAATAATGTCGCCAAGATTAAAGTTGTGGTACGTAAAAGGCCTTTAAACAAGAAAGAGCTTACTAAGAAGGAGGATGATGTCGTAACTGTGTCTGACACTGCATATTTGACAGTCCATGAACCTAAACTAAAGGTTGATTTGACAGCTTATGTGGACAAGCATGAGTTTTGCTTTGATGCCGTTCTTGATGAGCATGTTACCAATGATGAAGTATACCGAGCTACAGTTGAACCAATTATTCCTACAATTTTTGAACGTACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAGACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAGTTGCATCAGCCAGTTTACCGGAGTCAGAGATATAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAGCTTTTTGATCTTCTTAGTGACAGAAGGAAACTTTGTATGAGGGAAGATGGACGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTTGGACGTTCAGGTTGTCAAAGAATTCATTGAAAAGGGAAATGCTTCAAGAAGTACAGGATCCACGGGTGCTAATGAGGAGTCCTCCAGGTCGCATGCTATCTTACAGTTGGTTGTAAAGAAGCACAATGAGGTGAAAGAGGGCAAGCGAAATTCAAACACTGATGCAAATGATGCAAGAAGTGGGAAGGTCGTAGGGAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGCGCTGACACTACTGATAATGATCGTCAAACACGGATTGAAGGAGCCGAAATTAATAAGAGCCTTTTGGCTTTGAAGGAATGCATTCGAGCTTTAGACAATGACCAGATCCATATTCCATTCCGGGGAAGCAAACTTACAGAAGTGCTGCGGGACTCCTTTGTAGGAAATTCAAAAACTGTCATGATCTCTTGCATATCTCCAGGTGCTGGGTCTTGCGAACACACGCTTAACACCCTACGTTATGCTGATCGGGTTAAAAGTCTTTCCAAAAGTGGAAATCCTAGAAAAGACGCAATACCCAATTGTGTACCACAAACTAATAAAGATGTTTCATCTACATCAACCCTTCCAGCTAGTGTTGGTGCAGAGGATTTTATCGATCAGCGCCAAGAGAAACCAATGGATATGGGCAGGAAGCCACTTGAAAAGGAGAAAACTATGTATAGCTCTGCTGCTATTGCTGACAAACAGTTACCTAGTATTTCTTCAAATTACCTATCAAATGGACGAGAAGAAAAAGGCATCACTTATCCTTCAATGGAGAGGGAGAGGTTTGAAATGAAGAACTCTTATAATGATAATTCCAGTCAAAAGATTAACTCTTACCCACAAAATGGTACAGATGAGAAAGTGCAAAAGGTATCTCCCCCACGCAGAAAAGGTTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATACCGTTGAAGAAAAAGGCTTGACTTATGCTTCAGTGGAGAGAGAGAAGTTTGAAATGAAGAACTCTTATAATGATTCTTCGAGTCCAAAGATGAACTCTTACGCACGAAATGATACAGATGAGAAAGTGCAAAAGGTTTCTCCCCCACGCAGAAAAGGTTTTAAAGATGAAAAGTCTGAAAGGCCTGCAAATTTGATGAAAAGGGATACCAATGCTTCTGATCTCTCGACCACAAGCTCCAGGCAACAGCAAACCACAGTGAATCACAACACTGTTACCTCTGGATCCAGGCTTTATGACGCAGAGTCAGCACCTGACGTGAATATCAATGCAGTACTTGAGGAGGAAGAAGCACTAATTGCCGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCCGAAGTCGACCAACCAGGTAGCCGTATTGACAACTATGTAGCCCAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCTAGTCTTGTGGGTCTTCAAGCTCGCCTTGCAAGATTCCAACATCGACTAAAAGAACAGGAAATTCTGAGTAGAAAAAGAGTTCCCCGTTGA 2637 0.4297 MPPQGNAAAAVYDQPAGGSLQSASTDAGDAVMARWLQSAGLQHLGSPLASSGVDHRLFPNLLMQGYGAQSAEEKQRLFKLMRNLNFNAESGSELYTPNTQTLGGGSASDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHMISESFEQSPIIPGDTRVFEDDFYPINSKLEKEAEVDASISLPMNEKENSTRENNVAKIKVVVRKRPLNKKELTKKEDDVVTVSDTAYLTVHEPKLKVDLTAYVDKHEFCFDAVLDEHVTNDEVYRATVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRSQRYKLWLSYFEIYGGKLFDLLSDRRKLCMREDGRQQVCIVGLQEFEVLDVQVVKEFIEKGNASRSTGSTGANEESSRSHAILQLVVKKHNEVKEGKRNSNTDANDARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDAIPNCVPQTNKDVSSTSTLPASVGAEDFIDQRQEKPMDMGRKPLEKEKTMYSSAAIADKQLPSISSNYLSNGREEKGITYPSMERERFEMKNSYNDNSSQKINSYPQNGTDEKVQKVSPPRRKGSKDEKSERPANWMKRDTVEEKGLTYASVEREKFEMKNSYNDSSSPKMNSYARNDTDEKVQKVSPPRRKGFKDEKSERPANLMKRDTNASDLSTTSSRQQQTTVNHNTVTSGSRLYDAESAPDVNINAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVAQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPR* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1310 878 MobiDBLite consensus disorder prediction 657 684 - -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 549 564 - -
Mtr2g1310 878 Coils Coil 795 826 - -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 534 599 - -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 635 656 - -
Mtr2g1310 878 CDD KISc_KIF2_like 197 531 - -
Mtr2g1310 878 Pfam Kinesin motor domain 203 532 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 Gene3D Kinesin motor domain 173 536 IPR036961 -
Mtr2g1310 878 SMART kinesin_4 195 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 MobiDBLite consensus disorder prediction 717 749 - -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 570 590 - -
Mtr2g1310 878 ProSitePatterns Kinesin motor domain signature. 432 443 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr2g1310 878 PANTHER KINESIN-LIKE PROTEIN 737 877 - -
Mtr2g1310 878 PANTHER KINESIN-LIKE PROTEIN 684 740 - -
Mtr2g1310 878 PANTHER KINESIN-LIKE PROTEIN 3 675 - -
Mtr2g1310 878 Coils Coil 851 871 - -
Mtr2g1310 878 PRINTS Kinesin heavy chain signature 278 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 PRINTS Kinesin heavy chain signature 388 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 PRINTS Kinesin heavy chain signature 433 451 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 PRINTS Kinesin heavy chain signature 483 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 MobiDBLite consensus disorder prediction 1 24 - -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 702 770 - -
Mtr2g1310 878 ProSiteProfiles Kinesin motor domain profile. 197 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g1310 878 PANTHER KINESIN-RELATED PROTEIN 6 3 675 - -
Mtr2g1310 878 PANTHER KINESIN-RELATED PROTEIN 6 737 877 - -
Mtr2g1310 878 PANTHER KINESIN-RELATED PROTEIN 6 684 740 - -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 751 770 - -
Mtr2g1310 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 533 IPR027417 -
Mtr2g1310 878 MobiDBLite consensus disorder prediction 635 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1310 Mtr-Chr2 14260608 14269581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1310 189 533 Calmodulin-binding Proteins AT5G65930 33.053 6.82e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1310 K10393 - gmx:100800014 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1310 2 14260608 14269581 Mtr2g1310 2 14260608 14269581 ECH