Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1303 ATGATGATAGACCTCAAATACATATGGGTGCTAGTTTCAATCAACAGGTACATTCTCAACACAATACAAAATGAAAAAACAAGGAACACTCTAAAAACAAGATGTATATCAAACTTAAGGACTCAAAACCAAGAATTCTTTGAATTCTCTGACCAATCAGTCTTATCCAATCTTTATTATGGCATTGACAACATTGAAATTGCAATACAATCACAACATCCAGAACAAAGATCTTTTAACCTTAAAAAGTCAGAAGAAATGCTTCAAGTTCCAGCAATGCTTGATGAAGATGAATTCACTGCTTCAATTCCAAATCATTACTTGGTTTGTTGCTCTTACTTTTATCTCTCAGTTGTTAGGAAGCTTCAAGGTGATGAATGGCAAGCTGCACTTCATTTTCTTCAAGCTGTTTTGGTTTCTCCAAAGCTTGTTTGGAATGAATTTGCACCTCAACTTTGTGAAAGTCTTTTCAAGAAGCATGAAAATAGAAGTTTGGAATTTGTTAGTTCTTTGAATTCTGAGGAAGAAATCAATGAAGTAATTGTTAAGGAGAAGGCAAGGAGATATAAGGAGTGTTTGGTGTATTATCAGGTCATGCTTTATGGAGAGATTCCATGGTGGAGCAGTTATTGCAGCAATAATTCAGCAAATTATATGGATGTATCCAATACCAGCTGTGTATCTTCTACTTCAGTTCAACATGAACAAAGATTGAAAACTTGCAATACATGGCAGTATGGGAAGGTTCACCCAATGGATCCTCAAGATGTGATGCAAGAACAGCTGAGTTCAAAAAACATAATTAACCTTGATTCAAGCAGATTCACAAAAGATGTTGTTGCTTTATCGATCTCGAAACGGATAGAAAAAATGAGTATTGATTTAAATTGCCGTGTCGAGGATTTATTAATCGAAGAAGCATTGCAGCCACTAGAATTCCATCTCTTTGATCATGCAAGCAGAAATCATAAACTCGGCCCGAAAAACCGCGAAGAAAGTTCTAAGATGAAATTGCAAACATTAGAAAAATGTGGTGAAGAGTATATTGTAGACACTGCATCGATTTTTGAGAGTTTAATCAGTTCATCAGGAACTAATTATGGTTCATTAAAGGATGTGATTTTGGATGAACTACTTATAGTGATCTCAACTTCGAAAGAGGAAAAGGAACTAAGAACATCAGTATCAATTCTAACAACAATAATTTCAAGGAACAAGTCAATTATAGAAGATGTGAAGAAAAAAGGTTTAAGGTTATGTGATTTAGCAAGTGCCCTAAAACAAAATGTTCATGAAGCAGCAATTCTAATCTATTTAATATATCCATCTCCTATAGATATAAATACACTGGAAATTTTGCCAATATTAGTAGAGATTGTATGCACTTCATCACAAAGTTGTTACAAGAGTAATAAGCAAGAAGAATCACTTCTTATGACACCTCATGCAGCATCGTTGATGATCATTGAAGAACTTGTAACTTCAATTGACTATGCTACAAATAACATGCATTTGGAAGTAATCAGTTCCCCTCATGTTCTCAGTGGACTTATAGAAGTTGCAAGAAATCATAATCTTGATGAGTTTTTGTCTTTGACTACCATTCTTATAAAATGCATGCAGTTTGATTCACAGTGTAGAAAGTATGTGTCACAGTTCACTCCTCTTGCTCCATTTCTACACCTTCTAGAGACGGAAAATGTTCATGCCAAATGCACGGCGCTCGAGTTTTTTCAGGAAATCCTATGCATACCAAGATCATCAGCTATTAATCTGCTGCAGAGGATAAAACAAGAAAGCAGAATCAATATTATGCAGATACTAATGCATTGTGCCCATCAATTACAACCTGATCACCAGATTTTAGCTGCTAACCTATTGATTCAGTTAGACACATTGAACCCAACTGATAAAAGCTTGTTCAGAGAAGAAGCTGTGCAGATTCTTCTAAGGACATTGACATCTGAAGAAAGCTCAGAACATATATTATCGGCATCCATTCTATCAAATCTTGCTGGTACATACGCTTGGACAGGAGAATCATATACAGCAGCATGGCTTCTGAGAAAGACAGGCTTGACCTCTCCCTATCATCAAAACATGATACGAAACTTCAATTGGTTGGATCAGAGTCTACAGGATACAAGCATAGATGTATGGTGCAGCAAAATTTCCAAATGTATCATAAGTGTTGGAGATTCAATCTTCCATACTTTAGAGAGAGGACTGAGAAGCAAGATTAAAAGGGTTTCTAGAGACTGCCTTATAGCCATCTCATGGCTTGGATGTCAAATATCAAAAAATCCAGACAGCCTCAGTAATTCTGCATCTGAGATTGTATTAAGAGGAATTGAGCAATTTCTGCATCCTGGGATGGAATTGGATGAAAGACTTTTGGCATGTATGTGCATGTATAATTATGCCTCAGGGAAAGGAAAGCAAAAACTAATGCAATTCTCGGAAGGAGTAAAGGAATCATTAAGACGACTTTCAAACATAACCTGGATGGCTGAGGAGTTACATAGGGTAGCTGATTTCTTACTTCCAAACACATCACGTATTTCTTGTGTTCATACACAAATCCTTGAGGCAGGTCGGAACTTTAGCACATCAGTTTGCTCCCTCATATACTACAAGGGACTGTTGTTCAGTGGATATTCAGATGGATCAATTAAGGTCTGGGATATTAGGGGGCACTCAGCTAGCCTTTTATGGGACATTAAGGAGCACAAGAAGTCGGTGACATGCTTTTCAATTTATGAACCACTAGACAGTCTTTTAAGTGGATCCACTGATAAAACCATAAGGGTGTGGAAAATGAACCAAAGAAATCTTGAATGTCTTGAAGTGATAGTCATGAAGGAACCAGTTCATCATTTGCGCGCACATGGCGAGACAATTTTCGCAATTAGTGAAAAACAAGGAATAAAGCTTGTTAACAAATCAAGAGAGATAAGGGATATTTTCAAAGGTAAGCATGGAAAATGCATGGCAGTGGATCATGGAAAGTTATATATTGGCTGCACAGACTCAAGCATACAGGAGTATAACACAACACACAATAGGGAACTAGAAATCAAACCACCTACAAGAAGTTGGAGGAAGCAAAGTAAACCAATCAATTCAATTGTAGCCTATAGAGATTGGCTCTATAGTGCAAGTAAGCATGTTGAAGGAACAACATTCAAGGAATGGAAAAGAAGTGCAAAACCCAAAATTTCAATCCTTACTGACAAAGGAGATAATGTGGTAGCCATGGAAGTGGTAGAAGATTTCTTATACCTAATCTCTAGCTCATCAGCAAGCAGCATTCAGATCTGGTTGAGAGGAGTGCCAAAAAAGTTGGGGAGATTATCAGCAGGGAGCAGGATAACAAGCATCTATGCTGCCAATGACATTATTTTTTGTGGTACTGAGAAGGGACTAATCAAGGGCTGGATCCCTCTATAG 3450 0.3707 MMIDLKYIWVLVSINRYILNTIQNEKTRNTLKTRCISNLRTQNQEFFEFSDQSVLSNLYYGIDNIEIAIQSQHPEQRSFNLKKSEEMLQVPAMLDEDEFTASIPNHYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPKLVWNEFAPQLCESLFKKHENRSLEFVSSLNSEEEINEVIVKEKARRYKECLVYYQVMLYGEIPWWSSYCSNNSANYMDVSNTSCVSSTSVQHEQRLKTCNTWQYGKVHPMDPQDVMQEQLSSKNIINLDSSRFTKDVVALSISKRIEKMSIDLNCRVEDLLIEEALQPLEFHLFDHASRNHKLGPKNREESSKMKLQTLEKCGEEYIVDTASIFESLISSSGTNYGSLKDVILDELLIVISTSKEEKELRTSVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLIYPSPIDINTLEILPILVEIVCTSSQSCYKSNKQEESLLMTPHAASLMIIEELVTSIDYATNNMHLEVISSPHVLSGLIEVARNHNLDEFLSLTTILIKCMQFDSQCRKYVSQFTPLAPFLHLLETENVHAKCTALEFFQEILCIPRSSAINLLQRIKQESRINIMQILMHCAHQLQPDHQILAANLLIQLDTLNPTDKSLFREEAVQILLRTLTSEESSEHILSASILSNLAGTYAWTGESYTAAWLLRKTGLTSPYHQNMIRNFNWLDQSLQDTSIDVWCSKISKCIISVGDSIFHTLERGLRSKIKRVSRDCLIAISWLGCQISKNPDSLSNSASEIVLRGIEQFLHPGMELDERLLACMCMYNYASGKGKQKLMQFSEGVKESLRRLSNITWMAEELHRVADFLLPNTSRISCVHTQILEAGRNFSTSVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASLLWDIKEHKKSVTCFSIYEPLDSLLSGSTDKTIRVWKMNQRNLECLEVIVMKEPVHHLRAHGETIFAISEKQGIKLVNKSREIRDIFKGKHGKCMAVDHGKLYIGCTDSSIQEYNTTHNRELEIKPPTRSWRKQSKPINSIVAYRDWLYSASKHVEGTTFKEWKRSAKPKISILTDKGDNVVAMEVVEDFLYLISSSSASSIQIWLRGVPKKLGRLSAGSRITSIYAANDIIFCGTEKGLIKGWIPL* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1303 1149 SUPERFAMILY ARM repeat 348 848 IPR016024 -
Mtr2g1303 1149 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 907 941 - -
Mtr2g1303 1149 ProSiteProfiles Trp-Asp (WD) repeats profile. 907 941 IPR001680 GO:0005515
Mtr2g1303 1149 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 338 1149 - -
Mtr2g1303 1149 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 8 297 - -
Mtr2g1303 1149 Pfam WD domain, G-beta repeat 904 939 IPR001680 GO:0005515
Mtr2g1303 1149 ProSiteProfiles Trp-Asp (WD) repeats profile. 881 897 IPR001680 GO:0005515
Mtr2g1303 1149 Gene3D - 850 1148 IPR015943 GO:0005515
Mtr2g1303 1149 SUPERFAMILY WD40 repeat-like 875 1145 IPR036322 GO:0005515
Mtr2g1303 1149 SMART WD40_4 855 895 IPR001680 GO:0005515
Mtr2g1303 1149 SMART WD40_4 982 1017 IPR001680 GO:0005515
Mtr2g1303 1149 SMART WD40_4 1069 1108 IPR001680 GO:0005515
Mtr2g1303 1149 SMART WD40_4 900 939 IPR001680 GO:0005515
Mtr2g1303 1149 PANTHER OS04G0584500 PROTEIN 8 297 - -
Mtr2g1303 1149 PANTHER OS04G0584500 PROTEIN 338 1149 - -
Mtr2g1303 1149 Gene3D - 352 844 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1303 - - mtr:MTR_2g436530 2266.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1303 2 14211417 14218907 Mtr2g1303 2 14211417 14218907 ECH