Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1301 ATGGAACTTAACTCTTTGTATTCCTCATTTGAAATGCTTGCAAAACTTATGAGCACTAATGTCTCATCTAACCATTTTTTTGCAGTGCTTTTGGTAGTAGGTTTAGCAACCCTTTTCTTTGCATGTAGAAGAAAAGTGCACATTTATTTGATTGATTTTAACTGCTTTTGCCCCCCAAGTTCATATAGACTACCTAAAGCCATGTTTGAAGAGAACAACTTTTTTGATGATATGGAACAAGAAGCTATTGATTTCCAAAGCAAAATCAGTGCAAAATCTGGATTCAGTGATGAAACATCCATTCCTCCATGTCTTGCTCAAATACCTAAAAGTAAAGCTCTAACCTTTGCACTTGAAGAAGCTGAGTTAATAATGTATTCAGCAATAAAAGACCTTTTACAAAAAACCAAAATCAACCCAAAATCCATTGACATTGTAATTACTATTAGTAGCATCTTCTGTCCTACACCATCTCTTAGTTCCATGGTGGTTAACAAATTCAAGATGAGAAGCAACATCATGAGCTTTCATCTATCAGGTATGGGATGCAGTGCTGGAATTATAGCTGTTGGTCTTGCAAAAGACTTGTTGAGAGTTCATAGAAACTCATTGGCTTTAATAGTAAGCACAGAGACACTTAGTTTAAATTGGTACACAGGTAAAGTTCCATCTATGCTACTAACTAATTGTCTATTCAGAATGGGAGGATCAGCTATACTGATGTCAAGCAGGGTTCAAGATAAGCATAAGGCAAAGTATGAGCTAAAACATATTGCTAGAACAATCAATGCATATGATGATCAATCTTATGCATGTGTATACCAGGATGTGGATCCAGATAACAAACTAGGTGTATCGATATCGAAGAACATAGTCAATGTTTGTGGAGATGTGTTGAAGAAAAATATTGCTTCATTGGGACCATTGGTTTTACCATGGAGGGAGCAATTCTTATATGTCGTTTCAATTATTTATCACAAACTTTGGAGTAGAAGAAGAAGAACAAGCATATATACTCCGAAATTCAATAGGGCTTTTGAGCATTTCTGCATACATTCAGGAGGAAGAGCTGTTATACAAGCCATTGAGAAAAATTTGAAGCTAAGGAGAGAGGATGTTGAACCATCAAAAATGACTCTGTACAGATTTGGAAACACTTCATCTTCTTCAATTTGGTATGAGTTGTCATACATTGAAGCAAAAGGGAGGATGAAATGTGGAGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTTTAGGTGACGTGAAGCCTGATACCACCACTGCGTGGAGAGACACTATTCACTCATACCCAGTAGATATTTTGGGAACAAACTGA 1368 0.367 MELNSLYSSFEMLAKLMSTNVSSNHFFAVLLVVGLATLFFACRRKVHIYLIDFNCFCPPSSYRLPKAMFEENNFFDDMEQEAIDFQSKISAKSGFSDETSIPPCLAQIPKSKALTFALEEAELIMYSAIKDLLQKTKINPKSIDIVITISSIFCPTPSLSSMVVNKFKMRSNIMSFHLSGMGCSAGIIAVGLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLTNCLFRMGGSAILMSSRVQDKHKAKYELKHIARTINAYDDQSYACVYQDVDPDNKLGVSISKNIVNVCGDVLKKNIASLGPLVLPWREQFLYVVSIIYHKLWSRRRRTSIYTPKFNRAFEHFCIHSGGRAVIQAIEKNLKLRREDVEPSKMTLYRFGNTSSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCLGDVKPDTTTAWRDTIHSYPVDILGTN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1301 455 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 17 452 - -
Mtr2g1301 455 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 455 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr2g1301 455 SUPERFAMILY Thiolase-like 256 428 IPR016039 GO:0016746
Mtr2g1301 455 SUPERFAMILY Thiolase-like 38 244 IPR016039 GO:0016746
Mtr2g1301 455 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 346 427 IPR013747 -
Mtr2g1301 455 Gene3D - 63 427 IPR016039 GO:0016746
Mtr2g1301 455 PANTHER 3-KETOACYL-COA SYNTHASE 17 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr2g1301 455 Pfam FAE1/Type III polyketide synthase-like protein 43 327 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mtr2g1301 455 CDD CHS_like 28 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1301 Mtr-Chr2 14181645 14183297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1301 6 449 Acyl Lipid Metabolism Gene Families AT1G71160 51.322 1.27e-164 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1301 K15397 - gmx:100783404 706.442