Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1289 ATGGTTGCTCAAGAGAAATCCCAAAAGACATACCCGACAACTGCTGAGGTGGTGGACGAGCTAAAGAGAATGATGGACATAGGTTTCCCAATAGCAGCCATGAGCATAGTAGGATACCTCAAAAACATGATCTTAGTTGTTTGCATGGGAAAGTTGGGAAGTCTTGAGTTAGCAAGTGGTGCTTTGGCCATAGGCTTCACCAATGTAACCGGATATTCAGTCCTTTCAGGTCTAGCCATGGGAATGGAGCCTCTATGTACTCAAGCCATTGGTTCACAAAACTTCTCTTTAGTCTCTCTCATATTAAGAAGAACAATTCTCATGTTATTAGTAGCTTCATTACCCATTTCACTCTTGTGGCTAAATCTTGAACCATTTATGCTATCCCTTCATCAAAATCAAGATATAACAAGAATAGCAAGCCTCTATTGCCGCCTCTCGATTCCCGATCTTATCGCGAATAGCTTCCTTCATCCGATTCGTATCTATTTACGTAGCAAAGGAACAACTTGGCCATTATTGTGGTGCACTTCACTTTCCGTTATCATTCACATCCCTATCATCATTTTCTTAACCTTCAAACTTCACCTTGGTGTACAAGGTATTGCTATTTCAGCTTTTGTTGCAAATTTCAATACCCTTTTTTTCCTTTTATCATACATGTTCTACATGCATATCTCACATGTTTCAATCTCCATACCTAACCCTAGTCCTCCCTTGTTATCATCACAACAACAAAAACCATCAAGTGTCAAAACCCTAGGCAAAGAATGGGGCATGTTAATAAGGTTTTCTATTCAAAGTTGTCTTGGAGTTTGTTTAGAATGGTGGTGGTATGAATTCATGACAATTCTAGCTGGTTACCTTTATAACCCTCGTGTAGCTTTAGCCACGGCCGGAATAGTGATACAAACAACATCACTTATGTACACTTTACCAACGGCACTTAGTGCTTCGGTTTCAACAAGGGTAGGGAATGCACTTGGAGCTGGTCAACCATCAAAAGCAAATTTGTCAACTATGGTAGCAATTGGAATGTCACTAGCAAGTTCAACATTAGGGTTATTATGGACAACATTAGGAAGAGAAAAATGGGGGAAAGTGTTCACAAATGATAAAGAGGTGCTAGAGTTGACAATGGCAGTTTTACCTATAATTGGTGTTTGTGAGTTAGCAAATTGTCCACAAACAACTAGTTGTGGAATACTTAGAGGGAGTGCAAGACCAGGTATTGGGGCAGGGATAAATTTTTACTCATTTTACTTGGTGGGGGCGCCAATAGGAATAGTGTTGGGGTTTGTTTTGAAATTAGGGTTGGTGGGGTTTTGTTATGGTTTGTTGGCAGCACAAATAGCATGTGTGGTATCAATTCTTGTTGTGGTATATAACACTGATTGGGAAAGAGAGTCATTGAAGGCAAAAAGCTTGGTGGGTAGTGATACATGTGACACATTATTTGCTCATGTTGAAGACCAAATAATCAAATGTGAGCAAGGTATTGTCTTTCTCAATGAGAACAAGTGA 1524 0.3976 MVAQEKSQKTYPTTAEVVDELKRMMDIGFPIAAMSIVGYLKNMILVVCMGKLGSLELASGALAIGFTNVTGYSVLSGLAMGMEPLCTQAIGSQNFSLVSLILRRTILMLLVASLPISLLWLNLEPFMLSLHQNQDITRIASLYCRLSIPDLIANSFLHPIRIYLRSKGTTWPLLWCTSLSVIIHIPIIIFLTFKLHLGVQGIAISAFVANFNTLFFLLSYMFYMHISHVSISIPNPSPPLLSSQQQKPSSVKTLGKEWGMLIRFSIQSCLGVCLEWWWYEFMTILAGYLYNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVGNALGAGQPSKANLSTMVAIGMSLASSTLGLLWTTLGREKWGKVFTNDKEVLELTMAVLPIIGVCELANCPQTTSCGILRGSARPGIGAGINFYSFYLVGAPIGIVLGFVLKLGLVGFCYGLLAAQIACVVSILVVVYNTDWERESLKAKSLVGSDTCDTLFAHVEDQIIKCEQGIVFLNENK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1289 507 Pfam MatE 269 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g1289 507 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g1289 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 482 - -
Mtr2g1289 507 CDD MATE_eukaryotic 20 472 IPR045069 GO:0042910|GO:1990961
Mtr2g1289 507 TIGRFAM matE: MATE efflux family protein 30 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g1289 507 PANTHER PROTEIN DETOXIFICATION 55 12 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1289 Mtr-Chr2 14065350 14067744 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1289 K03327 - gmx:100785533 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1289 2 14065350 14067744 Mtr2g1289 2 14065350 14067744 ECH