Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1280 ATGGCGGGGAATTCACCTGACTCTCACCATTTCAACCATGACTCTCTCCTCCGCTACTGTTCTTCCAACGTTTCTGGCTTCCCTCTTTCTCCAACTCATTTCAATCTCTCCCAGTTTGGACATGGACAGTCTAATCCAACATACTTGATGGAAGTTGGTTCAAATGGATCCATTGTCAAGAAATATGTTCTTAGAAAAAAGCCTGCTGGGAAATTGTTGGCTTCAGCTCATGCTGTTGAAAGAGAGTTTCAGGTTCTCCAGGCTCTAGGCAATAATACCAATGTTCCAGTTCCTAAAGTTTTCTGCTTGTGCAATGATCCAGCTGTTATTGGAACACCATTTTATATTATGGAGTATTTGGAAGGACGGATATTCATCGATCCCAAATTACCAGGTTTGGCGCCGCAGAGTAGGAGCACAATTTATCGGGAAACTGCTAAAACCTTAGCTTCATTACATTCTGCTAATGTGGATTCCATCGGTCTGGGAAATTACGGGCGACGTAATGATTATTGCAAAAGACAGATCGAGAGATGGGCTAAGCAATATGTCTCCTCAACCAGTGATGGTAAACCTGCAAGCAATCCGAAAATGTTTGCTTTGATTGATTGGCTACGACATCATATCCCTTCTGAAGATTCTTCAGGAGCAACAGCAGGTTTGGTTCATGGAGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGCATACTTGACTGGGAACTATCTACCCTTGGTAACCAAATGTGTGATGTTGCATATATCTGTATGTGTTATGTTAAAGATATTGGCGAAAAGAGCGTACAAGAAGGTATGGAACGTTCTGGATTACCACAGGGAATTCCTTCTCTACCAGAGTTTTTGGCTGAATATTGCTCTCTAGCAGGAAGAAAGTGGCCTGTTGCTGAATGGAAGTTCTACGTTGCTTTTTCTTTTTTCCGAGGCGCTTCAATTTATGCTGGAGTGTATAATAGATGGGTTAAGGGTAATGCATCCGGTGGTGAGCGTGCTCGTTACACAGAAGTACTTGCTAATGGTCTCATCGAAGCTGCTTGGGAATTTATTGAACGCCAAGTTGTGCTTCCTCAGCACCCTCCTTCAGGTGTAAATGCAAAAGAATTAGTGCAGGACCTCCCAAATGAGGGAAGGTTTGCTCCTAGTCAAAAGGTTTTAGTGCTAAGGAATAAAATAATTAAGTTCATGGAGGAACACATATACCCCATGGAAGAGGAGTTTTATAAACTTTCCCAATCAGAAGCACGTTGGACTGTTCACCCAGCAGAGGAAAAATTGAAGGAGTTAGCAAAGAAAGAAGGCCTGTGGAACTTATGGATTCCTGTTGATAGTGCTGCGAGGGCAAAGAAAATTCTGTTTGATGGGAGCAATAATAATCTCTCTACTGATTCAAATGACCTATTGTTGGGGGCTGGTCTAACAAATCTCGAATATGGATACCTTTGTGAGTTCATGGGTCACTCTCTTTGGGCTCCACAAATATTTAATTGTGGTGCGCCTGACACAGGTAACATGGAGGTTTTATTGCGCAACGGAAATAAAGAACAAATGCTAGAATGGCTTATTCCTTTGCTTGAGGGGAAGATTAGGTCTGGATTTGCTATGACAGAACCGCAAATTGCATCTTCTGATGCAACCAATATTGAGTGTTCCATCAAAAGGCAAGGAGATTCATATATTATAAATGGGACAAAATGGTGGACTAGTGGTGCGATGGATCCAAGATGCAGAATTCTTATACTCATGGGGAAAACTGACTTCAATGCTGCAAGGCATAAACAACAATCGATGATCTTAGTGGATACTCAGACTCCTGGTGTTCACATAAAGAGACCTTTGACGGTGTTTGGCTTTGATGATGCGCCTCATGGGCATGCTGAAGTAGTATTTGAGAATGTTCGTGTGCCTGCCACAAATATCTTAATGGGTGAAGGACGTGGATTCGAGATCGCTCAAGCTAGGTTAGGTCCTGGAAGGCTGCACCATTGTATGAGACTAATAGGCGCTGCCGAGCGAGGCATGCAACTAATGGCTCACAGAGCTCTTAGTAGAAAAGCTTTTGGGAAAATGATTGCTCAACATGGTTCATTTGTTTCAGATTTGGCCAAGTGCCGAATCGAGCTAGAGAAGACTAGGTTGCTGGTGTTGGAAGCCGCGGACCAGCTTGATCGGTATGGAAACAAAAAAGCTCGAGGGATAATTGCAATGGCTAAGGTAGCTGCGCCAAAAATGGGATTGATGGTGCTTGACATGGCCATTCAAGTGCATGGAGCAGCTGGTGTATCATCTGATACTGTCCTGGCTCATCTGTGGGCAGCTGCGAGAACGTTGAGAATCGCAGACGGCCCGGACGAAGTTCACTTGGGTACCATAGGCAAGTTAGAATTAGAAATACAAAGAGCCAAGCTTTGA 2445 0.4352 MAGNSPDSHHFNHDSLLRYCSSNVSGFPLSPTHFNLSQFGHGQSNPTYLMEVGSNGSIVKKYVLRKKPAGKLLASAHAVEREFQVLQALGNNTNVPVPKVFCLCNDPAVIGTPFYIMEYLEGRIFIDPKLPGLAPQSRSTIYRETAKTLASLHSANVDSIGLGNYGRRNDYCKRQIERWAKQYVSSTSDGKPASNPKMFALIDWLRHHIPSEDSSGATAGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYICMCYVKDIGEKSVQEGMERSGLPQGIPSLPEFLAEYCSLAGRKWPVAEWKFYVAFSFFRGASIYAGVYNRWVKGNASGGERARYTEVLANGLIEAAWEFIERQVVLPQHPPSGVNAKELVQDLPNEGRFAPSQKVLVLRNKIIKFMEEHIYPMEEEFYKLSQSEARWTVHPAEEKLKELAKKEGLWNLWIPVDSAARAKKILFDGSNNNLSTDSNDLLLGAGLTNLEYGYLCEFMGHSLWAPQIFNCGAPDTGNMEVLLRNGNKEQMLEWLIPLLEGKIRSGFAMTEPQIASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILILMGKTDFNAARHKQQSMILVDTQTPGVHIKRPLTVFGFDDAPHGHAEVVFENVRVPATNILMGEGRGFEIAQARLGPGRLHHCMRLIGAAERGMQLMAHRALSRKAFGKMIAQHGSFVSDLAKCRIELEKTRLLVLEAADQLDRYGNKKARGIIAMAKVAAPKMGLMVLDMAIQVHGAAGVSSDTVLAHLWAAARTLRIADGPDEVHLGTIGKLELEIQRAKL* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1280 814 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 7 814 - -
Mtr2g1280 814 Gene3D - 392 540 IPR037069 GO:0016627|GO:0050660
Mtr2g1280 814 Pfam Acyl-CoA dehydrogenase, middle domain 543 644 IPR006091 GO:0016627
Mtr2g1280 814 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 7 814 - -
Mtr2g1280 814 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 391 669 IPR009100 GO:0016627
Mtr2g1280 814 Gene3D - 542 656 IPR046373 GO:0016627
Mtr2g1280 814 Gene3D - 122 365 - -
Mtr2g1280 814 Pfam Acyl-CoA dehydrogenase, N-terminal domain 399 539 IPR013786 GO:0016627|GO:0050660
Mtr2g1280 814 Pfam Phosphotransferase enzyme family 37 282 IPR002575 -
Mtr2g1280 814 SUPERFAMILY Protein kinase-like (PK-like) 32 336 IPR011009 -
Mtr2g1280 814 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 654 808 IPR036250 GO:0016627
Mtr2g1280 814 CDD ACAD10_11_N-like 35 301 IPR041726 -
Mtr2g1280 814 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
Mtr2g1280 814 Pfam Acyl-CoA dehydrogenase, C-terminal domain 656 804 IPR009075 GO:0016627
Mtr2g1280 814 Gene3D - 657 812 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1280 8 812 Acyl Lipid Metabolism Gene Families AT3G06810 75.154 0.0 1272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1280 K00249 - gmx:100788184 1407.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1280 2 13961600 13969222 Mtr2g1280 2 13961600 13969222 ECH