Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1233 ATGGGTTGTTTCAAAAACTTAATAACTTTCATGTTATTAATTTCCATATTAGTTACATTAAGTGAAGGTAGAGTACCCTTTGCATGTGACCCAAAAAATGGCTTAACAAGAAGCTACAAATTTTGCAATACAAGAGTACCAATTCATGCAAGGGTACAAGACCTTATAGGAAGACTTGCATTACCTGAAAAGATAAGGCTTGTTGTGAACAATGCAATTGCTGTTCCAAGACTTGGAATACAAGGTTATGAGTGGTGGTCGGAAGCTTTACATGGTGTTTCTAATGTGGGCCCAGGTACTAAATTTGGTGGGGCCTTCTCCGCCGCCACTAGCTTCCCTCAAGTTATCACCACCGCTGCTTCTTTCAATCAATCTTTGTGGCTTGAAATTGGACGGATTGTGTCTGATGAAGCAAGAGCAATGTACAATGGTGGAGCTGCAGGGTTGACTTTTTGGAGTCCTAATGTGAATATTTTCCGTGATCCACGGTGGGGCCGTGGCCAAGAGACACCCGGTGAAGATCCCACTGTGGCCGGAAAATATGCCGCCAGTTATGTTCAAGGATTACAAGGCAACGGTGCCGGAAACCGGCTCAAGGTTGCTGCTTGTTGTAAACATTACACTGCCTATGATCTTGATAACTGGAATGGTGTAGATAGGTTCCATTTCAATGCCAAGGTGAGTAAACAAGATTTGGCAGACACATATGATGTTCCGTTCAAAGCATGCGTTAGGGATGGGAAGGTGGCGAGTGTAATGTGTTCCTACAATCAAGTCAATGGCAAGCCTACTTGTGCTGATCCCGAACTCCTTCGTAACACCATCCGCGGTGAATGGGGCCTTAATGGGTACATAGTTTCGGATTGTGACTCAGTTGGAGTTTTATACGACAACCAACACTACACAAGAACACCTGAACAAGCAGCAGCCGCAGCGATTAAAGCGGGCCTGGACCTTGATTGTGGCCCATTTTTAGCCCTACATACCGATGGTGCTATTAAGCAAGGGCTTATTTCAGAAAATGATCTTAACCTTGCTTTAGCTAACCTTATTACAGTCCAAATGAGATTAGGCATGTTTGATGGTGATGCCCAACCATATGGTAATTTAGGCACAAGAGATGTTTGCTTACCATCCCATAATGATGTTGCACTTGAGGCAGCTAGACAGGGTATTGTCCTTCTACAAAACAAAGGAAATGCATTGCCATTATCCCCTACAAGATACCGCACTGTAGGAGTCATTGGTCCCAATTCTGATGTTACTGTTACCATGATAGGAAACTATGCTGGTATTGCTTGTGGTTATACGACGCCGTTGCAGGGGATTGCCAGATATGTGAAAACCATTCATCAAGCAGGATGTAAGGATGTGGGTTGTGGTGGAAATCAATTATTTGGGCTTTCAGAGCAAGTAGCAAGACAAGCTGATGCAACCGTATTAGTAATGGGCTTAGACCAGTCCATAGAAGCAGAATTTAGAGACAGGACTGGGCTTCTTTTACCAGGCCACCAACAAGAGCTAGTGTCTAGAGTAGCTAGGGCTGCAAGAGGCCCAGTTATCTTGGTACTCATGTCTGGTGGGCCTATTGATGTTACATTTGCCAAAAATGATCCCAAGATTAGTGCAATTTTGTGGGTTGGTTATCCTGGTCAATCTGGTGGCACTGCCATTGCTGATGTTATCTTTGGTAGAACTAATCCAAGTGGAAGGTTACCCAATACGTGGTACCCACAAGACTATGTAAGGAAAGTACCAATGACAAACATGGATATGCGTGCAAATCCAGCAACAGGGTATCCAGGTAGAACCTATAGATTCTACAAGGGCCCTGTAGTATTCCCATTTGGGCATGGGCTAAGTTACTCAAGATTCACACATTCCTTAGCACTTGCACCCAAACAAGTTTCAGTCCAATTTACAACCCCTTTGACTCAAGCCTTCACAAACTCAAGTAACAAAGCAATGAAAGTGAGTCATGCAAATTGTGATGAATTGGAAGTAGGATTTCACGTGGATGTGAAAAATGAAGGATCAATGGATGGGGCCCACACACTTCTAGTTTACTCTAAAGCACCTAATGGTGTTAAACAATTGGTGAATTTTCATAAGACTTATGTTCCTGCTGGATCAAAGACACGTGTTAAGGTTGGTGTTCATGTTTGTAACCACCTTTCTGCTGTGGATGAGTTTGGGGTTCGAAGAATCCCAATGGGTGAACATGAACTTCAAATTGGTGATCTCAAACATTCTATTTTGGTTCAAACTTTGGACCAAATTAAACATTAA 2289 0.4308 MGCFKNLITFMLLISILVTLSEGRVPFACDPKNGLTRSYKFCNTRVPIHARVQDLIGRLALPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFSAATSFPQVITTAASFNQSLWLEIGRIVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPTVAGKYAASYVQGLQGNGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDVPFKACVRDGKVASVMCSYNQVNGKPTCADPELLRNTIRGEWGLNGYIVSDCDSVGVLYDNQHYTRTPEQAAAAAIKAGLDLDCGPFLALHTDGAIKQGLISENDLNLALANLITVQMRLGMFDGDAQPYGNLGTRDVCLPSHNDVALEAARQGIVLLQNKGNALPLSPTRYRTVGVIGPNSDVTVTMIGNYAGIACGYTTPLQGIARYVKTIHQAGCKDVGCGGNQLFGLSEQVARQADATVLVMGLDQSIEAEFRDRTGLLLPGHQQELVSRVARAARGPVILVLMSGGPIDVTFAKNDPKISAILWVGYPGQSGGTAIADVIFGRTNPSGRLPNTWYPQDYVRKVPMTNMDMRANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVSVQFTTPLTQAFTNSSNKAMKVSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPNGVKQLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELQIGDLKHSILVQTLDQIKH* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1233 762 Gene3D Immunoglobulins 647 762 IPR013783 -
Mtr2g1233 762 Gene3D - 51 367 IPR036962 GO:0004553|GO:0005975
Mtr2g1233 762 PANTHER BETA-D-XYLOSIDASE 1 8 756 - -
Mtr2g1233 762 Gene3D - 378 623 IPR036881 GO:0004553|GO:0005975
Mtr2g1233 762 Pfam Glycosyl hydrolase family 3 N terminal domain 105 347 IPR001764 GO:0004553|GO:0005975
Mtr2g1233 762 Pfam Fibronectin type III-like domain 688 747 IPR026891 -
Mtr2g1233 762 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 625 IPR036881 GO:0004553|GO:0005975
Mtr2g1233 762 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Mtr2g1233 762 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Mtr2g1233 762 PRINTS Glycosyl hydrolase family 3 signature 274 292 IPR001764 GO:0004553|GO:0005975
Mtr2g1233 762 SUPERFAMILY (Trans)glycosidases 39 391 IPR017853 -
Mtr2g1233 762 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 622 IPR002772 GO:0004553|GO:0005975
Mtr2g1233 762 PANTHER SUGAR HYDROLASE-RELATED 8 756 IPR044993 GO:0009044|GO:0045493
Mtr2g1233 762 SMART Fn3_like_2 684 749 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1233 Mtr-Chr2 13369699 13375862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1233 7 755 Glycoside Hydrolase AT5G49360 71.879 0.0 1119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1233 - - gmx:100812823 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1233 2 13369699 13375862 Mtr2g1233 2 13369699 13375862 ECH