Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1222 ATGAGGGATATGGCTTTGCAGAAGTATGTTCCATCCGGCGATGCACCTACTGTTAGTTTGAAACATTTGAGTTCCAGTAAGGCCCCTGAGAAAACTCAGCCTGATGTAGCAAATCAAAATCATGACATGGATGTCGATGTTGACATTGGGGAAGTTTATTTTCTCATTATGCGCTTCCTTTCTGCTGGGCCATGTCATAAAACTTGTTCACATCTTTGGAATGAGCTTCTGGAGAATCAACTTTTGCCTAGAAGGTATCATGCTTGGTATTCAAGGAGTGGGGCATCCAGTGGAGTTCCACACGATGATGGTCAATCATTCCCTTTAGAAGATTACAATAAGTTGGCCGAGAGGTATCCTCATATTGAAAAGGATCACCTGGTAAAGCTTTTGAAGCAATTGTTATTAAATAAAGCCTCCCTGTCACCAGGCATGAGTACTGGAAATCCTCCAAATGCAGCTGATGTACCCACTCTTCTAGGAAGAGGATCATTTTCACTTCTGAGCTATGACGGGGATAAAGTGAATGAAGAAGTTAAACCACCACCTCCTTATATGCGCTGGCCTCATACGAAAGCCAATCAGGTTCATGGGCTTCATTTGAGGGAAATCGGGGGTGGTTTACCAAGACACCACCGTGCACCATCTATACGTGCTGCATGCTATGCCATTGCCAAACCTTCTACTATGGTACAGAAGATGCAAAACATCAAAAGAATAAGAGGACACTGTAATGCTGTTTATTGTGCTATATTTGATCGGTCAGGACGATATGTTATTACCGGTTCAGATGATCGACTCGTAAAAATTTGGTCAATGGAAACGGCATATAGTTTGGCCAGTTGCCGTGGACACGTTGGTGACATTACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGACTATATCATTCGAGTTTGGCGCTTGCCAGATGGCTTACCGATATCAGTTTTACGGGGACATACTGGAGCTGTTACAGCCATAGCCTTTAGTCCCAGACCTAATGCTGTTTACCAGCTTTTATCTTCCTCTGACGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCACTCAACTCCAAGGTTATACGTTCCAAAGCCATCTGATTCTACTGGAAGGAGCAGTGGCCCATCCTCAAATACAATGCCACAGAGTCATCAAATTTTTTGCTGTGCATTTAATGCTAATGGAACTGTCTTCGTCACTGGTAGCTCTGATAATCTTGCCAGGGTTTGGAATGCTTGTAAACTTAGTATGGAAGACGTGGAGCAACCAAATCATGAGATAGATGTACTGTCTGGTCATGAAAATGATGTAAACTATGTGCAATTTAGTGGATGTACAGTAGCATCTCGATTTTCTACAACAGAAACTTGGAAGGAGGATAATATTCCCAAATTTAAGAATTCCTGGTTGAATCATGACAACATAGTTACCTGCTCTCGTGATGGGAGCGCTATTATATGGATTCCAAAATCACGTAGGTCACATGGAAAAAGTGGTCGCTGGACTCGGGCATATCATCTCAGAGTTCCACCTCCACCTATGCCTCCACAACCTCAGAGAGGTGGTCCACGCCAGAGAATTCTTCCAACTCCACGCGGTGTAAATATGATAGCTTGGAGCCTAGACAACCGCTTTGTCCTTGCAGCTATTATGGATTGCAGAATCTGTGTTTGGAATGCTTCTGATGGCAGCTTAGTGCACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTTAATCCGCGGATAGTGATGAGTGCTGGATATGATGGAAGAACTATTGTATGGGATATATGGGAAGGCGTGCCTATCAGGATATTTGAAATTTCACGTTTCAAGATGGTGGATGGAAAATTTTCTCCGGATGGGACATCAATCATACTATCCGATGATGCTGGTCAACTATATATATTGAACACGGGCCAAGGTGAATCCCAGAAAGATGCCAAATATGATCAGTTCTTTCTTGGTGATTATCGGCCTCTCATTCAAGACACGCATGGTAATGTACTTGACCAGGAAACTCAGATCACTCCATATCGGCGTAATTTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATTTCAGCGGAGACGACTAGGAGCTTTAGGCCATGATTGGCGCCCGTCACCGCTAAAGCTTGCTATTGGCACTGATTTCAGCCTGGACCCAGCGTATCATATGCTTCCATTGGCTGACTTGGACCAGCTAGCAGAACCCCTACCAGAGTTTATAGATGCTATGGATTGGGAGCCAGACATTGAAGTGTTAGTTGATGATACCGATTCAGAATATAATTTAACTGATGATAGTTCTTCCCGGGGTGAGAAAGGATGTTCAAGCTCCAATGCCTCTGGTGATCCTGGTTGCAGCACAGATAACAGTGACGATGAAGACACTCACATGGATTGCATTCGTAGATCGAAGAGGAAAAAACAGAAGACCGGCATTGAGACTATGACTTCTTCTGGGAGACGTGTTAAAAGGAGGAATTTGGATGAGTGTGAAGGCAATGTTCACAGTAGTAGCCGAAGTAGAAAGGGAAAAAGTGGAAAAAAATCATCAAGGAGGAAATCTTCAAAATCAAAATCTTCCAGACCTCGAAGAGCTGCTGCACGCAATGCTCTGCATTTATTCTCAAAAATTACAGGTACACCAAATGAAGGAGAAGAAGATAGTTTGGTTGGTGATTCTTCAGATAGTGACTCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCCGGTAGAGCTTCCGAAAATGACCAACGGAATTATTCCAAGGGAAAAGAAGTATTACTGTATGAATCAGAGGACTCAAAATCTCATGAATTCACTGAGACTCGTGTAAACAGGAGGAGGTTGGTCCTCAAATTGCCAATTCGGGATTCATCTAAACCTGCGCACGAGTTTGAGAACCAGGCTGAGTTGGTTGGCTCATCGTCAAAAACTGCACAAGAATTTCCTGATTTTAATAGGAAGAGACCAAGTTCTTCAGAGCCAGGATATTGTTTGGGCAATGGAAGTTACTCTTCAATTGAAAGAACTGATCAAGTAAAACTTGACCAGGTAACGGACCATGTAGACTTGCTAGAGAAACTTAGATGGGGGGTGGTTAGAGCTCGTTCAGCTAAACCTCTCAGAATGAGAGAAGATGTGCCACTAGGTGCAAATCCCAACTCTGTAGAATGTCGTAACCATCTCAATGAAGAAGAAATTGTTAGTGTTGGGCATGACAGAGAGGACAAGGACTTCAGCGGTACCTCAACCCCTGCTTTAGAAATCCAAAATGGTGATAAGGTAGATAGTTTGACAGAAATAAATGAAAATTGTGCTGGCACTACCTCTCAGCCTTTCAATCTTACTGAGAATGGAGAGCCACTCACAGCTTCCAGCAATTACAGGGATCAAGATGAATCCCTAGTTTCTGCAAGCATGATTCCTGAGAATAATATTTTTGTACCTGTCGGCCAAAGTGGGGCTGACCAACTACCTGAACCAAATATTGGTTTTCCTTCTGTTTCAACAAAGCTAAGATCTAAAAGAGGTACAAGGAACCCTGAAAGTCCATGTAAGCCTGAAACAAAATCTTCAGTGCTAAACAATAATGCATCTAGCAGTAATGCTAATATTAATGTGAACAATGAAGAGCATGTGGTTGTGGTTAAGGATGACAACAATACTGGAGTAACATCTAATCAGAGAGAAAATTGTTCTCCAGAAGTTGATGTTCAGGCTAAACAAGTTAGTACTTCTCATGATTCTCTAGAACCACATTCAAATAGAGATAAAATGTTCAAAGCAGTTTATAGAAGATCAAGATCACATAGGGCTGTGACTAATTTAGCTGATGGTAGTGGCTTGGGAGAATCCACTTCAAATGGCAGCAACAGTAATTTTAATGTGGCAGTGGACAGTAATGGCACAAATGAAGCTCTTCATACCAATGGTTCCCTCGAGTTGGAACAAGGTTCTTGTGTCCCAAATAATGAGCAGAGTAATCTTAAAGTGCAGCAAGGAAATGGGTCTTGTATGGTTAGAATTCCTCAGAATGTTTCCCCAAATAAAGGAAAACTCACAGAAGAAGAAAGGGGTTCTAGTTCAAAATTGACTGTTGGTTTGAGGTCCACTAGGAATCGGAGGTCTACTTATAATATCCGTGAGACTAGTCCTGTAAATAGACGGAAATCACTACAATCTGCGGTGAAGGGGTCCTGGTTGCTGTTATCAACACATGAGGAAGGATGTAGATATATTCCTCAACAGGGCGATGAAGTTGTATATCTAAGACAGGGACACCAGGAGTATATAGAGTATAGCCGTAAAAGAGAATCGGGACCTTGGGTGTCACTTAAGGAACATCTGAGAGCTGTTGAATACTGTAGAGTTCAAAGCCTTGAGTATTCTCATGTTCCAGGGTCTGGTGATAGCTGCTGCAAAATGACCCTCGAGTTTTTAGATCCAAATTCAAGTGTTGTTGGCAAAACTTTTAAATTAACCCTACCTGAAGTGACTGGTTTCCCTGATTTTCTTGTTGAAAGAACTAGGTTTGATGCTGCTATCCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAAGAATGAGGATAACTCCTCCGGTAATTGGTGGGAGGGACGGATTCAGTTTGTAAAAGCCAAATCATCTGAATTTCCAGACAGTCCATGGGAGAGATACAGTGTTCGGTACAAGAGCGACCTCTCTGATGAACATTTGCATAGTCCTTGGGAGCTTTTTGATGCTGATACTCAATGGGAACAGCCTCATATTGATGATCACACAAGAAATAAACTGCTATCTGCTCTCACCAAAGTACAGCAGTCAGGAAACACAGTTCAGGATCGCTATGGATTGCATGAATTGGAGAAAATTTCAAATAAATCAAAATTTACAAACAGATTTCCTGTTCCTCTGTCAATTGAATTGATACAATCAAGGTTGGAGAATAGTTATTACCGTAGTTTGGATGCACTAAAGCATGATGTCTCAATTCTACTGACCAATGCCAACTCGTTTTTTGAAAAGGACTTAGTGATGACAACCAAAATCAAACACCTATCAGAGTGGTTCACTAGGACTTTATCATCTCTATAA 5190 0.4195 MRDMALQKYVPSGDAPTVSLKHLSSSKAPEKTQPDVANQNHDMDVDVDIGEVYFLIMRFLSAGPCHKTCSHLWNELLENQLLPRRYHAWYSRSGASSGVPHDDGQSFPLEDYNKLAERYPHIEKDHLVKLLKQLLLNKASLSPGMSTGNPPNAADVPTLLGRGSFSLLSYDGDKVNEEVKPPPPYMRWPHTKANQVHGLHLREIGGGLPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMEDVEQPNHEIDVLSGHENDVNYVQFSGCTVASRFSTTETWKEDNIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIVMSAGYDGRTIVWDIWEGVPIRIFEISRFKMVDGKFSPDGTSIILSDDAGQLYILNTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQITPYRRNLQDLLCDSAMIPYPEPYQSEFQRRRLGALGHDWRPSPLKLAIGTDFSLDPAYHMLPLADLDQLAEPLPEFIDAMDWEPDIEVLVDDTDSEYNLTDDSSSRGEKGCSSSNASGDPGCSTDNSDDEDTHMDCIRRSKRKKQKTGIETMTSSGRRVKRRNLDECEGNVHSSSRSRKGKSGKKSSRRKSSKSKSSRPRRAAARNALHLFSKITGTPNEGEEDSLVGDSSDSDSTLQESNIDSDESGRASENDQRNYSKGKEVLLYESEDSKSHEFTETRVNRRRLVLKLPIRDSSKPAHEFENQAELVGSSSKTAQEFPDFNRKRPSSSEPGYCLGNGSYSSIERTDQVKLDQVTDHVDLLEKLRWGVVRARSAKPLRMREDVPLGANPNSVECRNHLNEEEIVSVGHDREDKDFSGTSTPALEIQNGDKVDSLTEINENCAGTTSQPFNLTENGEPLTASSNYRDQDESLVSASMIPENNIFVPVGQSGADQLPEPNIGFPSVSTKLRSKRGTRNPESPCKPETKSSVLNNNASSSNANINVNNEEHVVVVKDDNNTGVTSNQRENCSPEVDVQAKQVSTSHDSLEPHSNRDKMFKAVYRRSRSHRAVTNLADGSGLGESTSNGSNSNFNVAVDSNGTNEALHTNGSLELEQGSCVPNNEQSNLKVQQGNGSCMVRIPQNVSPNKGKLTEEERGSSSKLTVGLRSTRNRRSTYNIRETSPVNRRKSLQSAVKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIEYSRKRESGPWVSLKEHLRAVEYCRVQSLEYSHVPGSGDSCCKMTLEFLDPNSSVVGKTFKLTLPEVTGFPDFLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERYSVRYKSDLSDEHLHSPWELFDADTQWEQPHIDDHTRNKLLSALTKVQQSGNTVQDRYGLHELEKISNKSKFTNRFPVPLSIELIQSRLENSYYRSLDALKHDVSILLTNANSFFEKDLVMTTKIKHLSEWFTRTLSSL* 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 12 38 - -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 787 955 - -
Mtr2g1222 1729 Gene3D - 533 667 IPR015943 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 993 1026 - -
Mtr2g1222 1729 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 29 1729 - -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 846 866 - -
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 388 420 - -
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 240 275 - -
Mtr2g1222 1729 SMART WD40_4 530 568 IPR001680 GO:0005515
Mtr2g1222 1729 SMART WD40_4 275 314 IPR001680 GO:0005515
Mtr2g1222 1729 SMART WD40_4 382 420 IPR001680 GO:0005515
Mtr2g1222 1729 SMART WD40_4 432 497 IPR001680 GO:0005515
Mtr2g1222 1729 SMART WD40_4 571 611 IPR001680 GO:0005515
Mtr2g1222 1729 SMART WD40_4 233 272 IPR001680 GO:0005515
Mtr2g1222 1729 SMART WD40_4 317 359 IPR001680 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 1187 1236 - -
Mtr2g1222 1729 Pfam Bromodomain 1662 1715 IPR001487 GO:0005515
Mtr2g1222 1729 ProSitePatterns Trp-Asp (WD) repeats signature. 598 612 IPR019775 -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 18 38 - -
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats profile. 388 420 IPR001680 GO:0005515
Mtr2g1222 1729 Gene3D - 1644 1729 IPR036427 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 795 814 - -
Mtr2g1222 1729 Gene3D - 216 388 IPR015943 GO:0005515
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 281 IPR001680 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 921 935 - -
Mtr2g1222 1729 CDD Bromo_WDR9_I_like 1601 1729 - -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 1213 1236 - -
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 359 IPR001680 GO:0005515
Mtr2g1222 1729 SUPERFAMILY Bromodomain 1661 1727 IPR036427 GO:0005515
Mtr2g1222 1729 PANTHER WD REPEAT DOMAIN 9 29 1729 - -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 1368 1399 - -
Mtr2g1222 1729 Pfam WD domain, G-beta repeat 235 272 IPR001680 GO:0005515
Mtr2g1222 1729 Pfam WD domain, G-beta repeat 279 313 IPR001680 GO:0005515
Mtr2g1222 1729 Pfam WD domain, G-beta repeat 392 420 IPR001680 GO:0005515
Mtr2g1222 1729 Pfam WD domain, G-beta repeat 572 611 IPR001680 GO:0005515
Mtr2g1222 1729 Pfam WD domain, G-beta repeat 320 359 IPR001680 GO:0005515
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats profile. 578 612 IPR001680 GO:0005515
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats profile. 282 323 IPR001680 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 369 388 - -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 936 955 - -
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 282 315 - -
Mtr2g1222 1729 SUPERFAMILY WD40 repeat-like 231 656 IPR036322 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 1135 1155 - -
Mtr2g1222 1729 Gene3D - 389 523 IPR015943 GO:0005515
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 370 388 - -
Mtr2g1222 1729 MobiDBLite consensus disorder prediction 868 893 - -
Mtr2g1222 1729 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 324 359 - -
Mtr2g1222 1729 CDD WD40 236 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1222 Mtr-Chr2 13237021 13256661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1222 232 420 Miscellaneous Gene Families AT5G08390 22.632 5.66e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1222 K11797 - gmx:100818665 2670.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1222 2 13237021 13256661 Mtr2g1222 2 13237021 13256661 ECH