Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1221 ATGTCAATTCAGTGCCTAGTAGGGCAAATCCTTCTTTCATATTCATTTTTAGTGTATACTTTATTTTGCATCATACCTTCTTTCTTTGCTCCAACCATGAGGTTCTCTTTGGCTTCTCCTCTGTTTCTATTGGGATTGTTCACAATAAACCTTATTCACACAGCAGATGCTCAAATAGGAATATGTTATGGTATGATGGGAAACAATCTACCACCGGCAAACGAGGTTATAAATCTCTACAAAGCAAACAACATTAAGAGAATGAGACTCTACGATCCTAATCAAGCTGCTCTAAATGCATTAAGAAATTCAGGCATTGAACTCATTCTTGGTGTGCCAAATTCCGACCTTCAAACCCTAGCCACCAACTCCGATAATGCACGTCAATGGGTACAAAGAAATGTATTGAACTTCTGGCCTAGTGTCAAAATCAAGTATATTGCAGTTGGTAATGAAGTGAGTCCAGTTGGAGGCTCTTCTTGGCTAGCCCAATATGTTCTACCTGCCACCCAAAATATATATCAAGCGATAAGAGCTCAAGGTCTTCATGATCAAATCAAGGTTTCAACCGCTATTGACATGACCCTTATTGGAAATTCATTCCCTCCATCTAAAGGTTCTTTTAGAAATGATGTTAGGTCATACCTAGATCCTTTCATTGGATACTTGGTATATGCAGGTGCACCTTTACTTGTCAATGTTTACCCTTATTTTAGCCATGTTGGTAACCCGCGCGATATATCTCTTCCTTATGCTCTTTTCACTTCACCGGGTGTTATGGTACAAGATGGTCCAAATGGGTACCAAAACTTGTTTGATGCTATGTTGGATTCGGTGCATGCAGCCCTAGATAACACCGGGATTGGTTGGGTGAACGTTGTTGTATCTGAGAGTGGTTGGCCCTCTGATGGAGGGGCGGCTACTTCATATGACAACGCACGTATTTATCTTGATAATTTGATTCGTCATGTTGGTAAAGGTACTCCACGAAGGCCTTGGGCTACAGAAACTTATATTTTTGCTATGTTTGATGAGAACCAAAAGAGTCCAGAATTGGAGAAACATTTTGGAGTGTTTTATCCTAATAAACAAAAGAAATACCCATTTGGATTTGGTGGAGAAAGAAATGGGGAAATTGTCAATGGTGACTTCAATGCAACTATTTCTCTTAAGAGTGACATGTAA 1185 0.3966 MSIQCLVGQILLSYSFLVYTLFCIIPSFFAPTMRFSLASPLFLLGLFTINLIHTADAQIGICYGMMGNNLPPANEVINLYKANNIKRMRLYDPNQAALNALRNSGIELILGVPNSDLQTLATNSDNARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNIYQAIRAQGLHDQIKVSTAIDMTLIGNSFPPSKGSFRNDVRSYLDPFIGYLVYAGAPLLVNVYPYFSHVGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRRPWATETYIFAMFDENQKSPELEKHFGVFYPNKQKKYPFGFGGERNGEIVNGDFNATISLKSDM* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1221 394 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 48 378 - -
Mtr2g1221 394 SUPERFAMILY (Trans)glycosidases 59 370 IPR017853 -
Mtr2g1221 394 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 48 378 IPR044965 GO:0004553|GO:0005975
Mtr2g1221 394 Pfam Glycosyl hydrolases family 17 59 369 IPR000490 GO:0004553|GO:0005975
Mtr2g1221 394 Gene3D Glycosidases 58 372 - -
Mtr2g1221 394 ProSitePatterns Glycosyl hydrolases family 17 signature. 291 304 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1221 Mtr-Chr2 13230850 13233488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1221 65 380 Glycoside Hydrolase AT4G16260 63.009 3.31e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1221 - - ccaj:109791097 625.55