Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1220 ATGATCACAGGCAACAGGAATGTAATGGCTTCTCTACTGCTACTATTTGCTCTGTTTACAGTAAATCTTCGCTTGACAAGTGCTCAAATAGGTGTTTGTTATGGCATGATGGGAAATAATCTACCATCACAACGTGAAGCAATAGATCTTTGCAAATCAAACAACATCAAAAGAATGAGGCTATATGATCCAAACCAAGCTGCTCTTGAAGCACTTAGAAATTCTGGCATTGAGCTTATGTTAGGTGTGCCAAATTCTGATCTTCAAAACATTGCTACCAACAATGACATTGCAATTCAATGGGTACAAAAAAATGTACTAAACTTCTACCCTAGTGTCAAAATCAAATACATCGCGGTTGGTAATGAAGTTAACCCAGTTGGTGGCTCTTCTCAATTCGCAAAATTTGTTCTTCCGGCAATCCAAAACATATATCAAGCAATAAGAGCGAAAAATCTGCACGATCAAATCAAGGTTTCAACGGCTATTGACATGACCATGATAGGAACTTCGTACCCGCCGTCTAAAGGTTCATTTAGAAGCGATGTGAGGTCATATTTGGATCCAATTATAGGCTACTTAGTATATGCAAATGCACCTTTATTTGCAAATATTTACTCTTATTTTAGCTATAAAGATAACCCAAAAGACATCTCACTTCAATATGCTTTATTCACTTCTCCTAATGTTGTGGTTTGGGATGGTTCAAGGGGATACCAAAATCTATTTGATGCTTTGTTGGATTCATTACATGCTGCAATTGATAATACTGGAATTGGTTTTGTTAAGGTTGTTGTGTCTGAGAGTGGTTGGCCTTCAGATGGTGGATTTGCAACTACTTATGATAATGCAAGAGTTTATCTTGATAATTTGATTAGGCATGTTAAAGGTGGGACACCAATGAGGTCTGGACCTATTGAGACTTATATATTTGGATTGTTTGATGAGAATCAGAAGAATCCTGAGTTAGAGAAACATTTTGGAGTGTTTTATCCTAATAAACAGAAAAAGTATCCATTTGGATTTCAGGGGAAAATTGATGGTACTAATTTGTTTAATGTGTCTTTTCCTCTTAAGAGTGACATTTAA 1089 0.3618 MITGNRNVMASLLLLFALFTVNLRLTSAQIGVCYGMMGNNLPSQREAIDLCKSNNIKRMRLYDPNQAALEALRNSGIELMLGVPNSDLQNIATNNDIAIQWVQKNVLNFYPSVKIKYIAVGNEVNPVGGSSQFAKFVLPAIQNIYQAIRAKNLHDQIKVSTAIDMTMIGTSYPPSKGSFRSDVRSYLDPIIGYLVYANAPLFANIYSYFSYKDNPKDISLQYALFTSPNVVVWDGSRGYQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGGTPMRSGPIETYIFGLFDENQKNPELEKHFGVFYPNKQKKYPFGFQGKIDGTNLFNVSFPLKSDI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1220 362 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Mtr2g1220 362 Pfam Glycosyl hydrolases family 17 30 340 IPR000490 GO:0004553|GO:0005975
Mtr2g1220 362 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 348 IPR044965 GO:0004553|GO:0005975
Mtr2g1220 362 SUPERFAMILY (Trans)glycosidases 30 341 IPR017853 -
Mtr2g1220 362 Gene3D Glycosidases 29 343 - -
Mtr2g1220 362 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 19 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1220 Mtr-Chr2 13224001 13225692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1220 36 349 Glycoside Hydrolase AT4G16260 62.461 2.73e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1220 - - gmx:100801599 546.584