Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1219 ATGACCCATGACCACGAGGTATTGGTCACTGCATATGAATCTCTATATAAATATGTGACTTGCAAAAATAAGTTTAGGACTCAACTTAATACTCAAGCTTTATTACACTTCCTTTGTGTTAAAGCTTTCTTTCCTAGCATGATCACAAGCAACAGTACCGTAATGGCTTCTCTGCTGCTACTGTTTGCACTGTTTACAGTAACTCTTCGCTTGACAAGTGCTCAAATAGGTGTTTGTTATGGCATGGAAGGAACCAATCTACCATCACAACGTGAAGCAATAGATCTTTGCAAATCAAACAACATCAAAAGAATGAGGCTATATGATCCAAACCCAGATGCTCTTGAAGCACTTAGAAACTCTGGTATTGAGCTTATGTTAGGTGTGCCTAACTCCGATCTTCAAAACATTGCTAACAACAAAGACATTGCAAATCAATGGGTACAAAAAAATGTACTAAACTTCTACCCTAGTGTTAAAATCAAATACATCGCGGTCGGTAATGAAGTTAATCCAGTTGGCGGCTCTTCTCAATTTGCAAAATTCGTCCTTCCGGCAATCCAAAACATATACCAAGCAATAAGAGCGAAAAATTTTCAAGATCAAATCAAGGTTTCAACGGCTATTGACATGACCATGATAGGAACTTCGTACCCGCCGTCTAAAGGTTCATTTAGAAGCGATGTGAGGTCATATTTGGATCCAATTATAGGCTACTTAGTATATGCAAATGCACCTTTATTTGCAAATATTTACTCTTATTTTAGCTATAAAGATAACCCAAAAGACATCTCACTTCAATATGCTTTATTCACTTCTCCTAATGTTGTGGTTAGGGATGGTTCAAGGGGATACCAAAATCTATTTGATGCTTTGTTGGATTCATTACATGCTGCAATTGACAATACTGGAATTGGTTTTGTTAAGGTTGTTGTGTCTGAGAGTGGTTGGCCTTCAGATGGTGGATTTGCAGCTACTTATGATAATGCAAGAGTTTATCTTGATAATTTGATTAGGCATGTTAATGGTGGAACACCAATGAGGTCTGGACCTATTGAGACTTATATATTTGGGTTGTTTGATGAGAATAAGAAGAATCCTGAGTTGGAGAAACATTTTGGAGTATTTAATCCTAATAATAAACAGAAAAAGTATCCATTTGGATTTTAG 1170 0.3667 MTHDHEVLVTAYESLYKYVTCKNKFRTQLNTQALLHFLCVKAFFPSMITSNSTVMASLLLLFALFTVTLRLTSAQIGVCYGMEGTNLPSQREAIDLCKSNNIKRMRLYDPNPDALEALRNSGIELMLGVPNSDLQNIANNKDIANQWVQKNVLNFYPSVKIKYIAVGNEVNPVGGSSQFAKFVLPAIQNIYQAIRAKNFQDQIKVSTAIDMTMIGTSYPPSKGSFRSDVRSYLDPIIGYLVYANAPLFANIYSYFSYKDNPKDISLQYALFTSPNVVVRDGSRGYQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFAATYDNARVYLDNLIRHVNGGTPMRSGPIETYIFGLFDENKKNPELEKHFGVFNPNNKQKKYPFGF* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1219 389 Pfam Glycosyl hydrolases family 17 76 385 IPR000490 GO:0004553|GO:0005975
Mtr2g1219 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 63 386 - -
Mtr2g1219 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 63 386 IPR044965 GO:0004553|GO:0005975
Mtr2g1219 389 ProSitePatterns Glycosyl hydrolases family 17 signature. 308 321 IPR000490 GO:0004553|GO:0005975
Mtr2g1219 389 SUPERFAMILY (Trans)glycosidases 76 387 IPR017853 -
Mtr2g1219 389 Gene3D Glycosidases 75 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1219 Mtr-Chr2 13217320 13220086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1219 82 389 Glycoside Hydrolase AT4G16260 61.093 1.37e-133 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1219 - - gmx:100801599 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1219 2 13217320 13220086 Mtr2g1219 2 13217320 13220086 ECH