Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1177 ATGGAGGCACTATTTAAAGGCTCTTCTTATCTCTTACCTTCCTCTAAACCTCCAAAAACCATTACCATGTTAGCATCAAACCCTCTTCGTTTCAATTTCCCAAATCACCACCTTTCTTCATCCTCATCGTTTTCACGCCAATTTTCTCTACAAAATAACCCCAGAAAATCATTCTCACTCATTATGAATGCCCGGAAGAAAGATAAGAAAGAAGATACTCATAGCTTTGTGCCCAAATCATATGAAGCCACCGGCTTCTTCCCTGAATCTGTTCTTCTTAAAAAGAAGACAGTTGAGGAGGATGGTAAACTTCTTCCGGAGTTTGAAGATGATGATGAAAGAAAGCTCTATGAATCCCTAAAGCTTGACGTGGAAACTGATATGGACGTTGAACTATTGCGCCACTATGAGATTGTTTACTTGATTCATGAGAAACATGCAGAAGAGGTTGTAGCTGTTAATGAGAAAGTTCAAGACTTTTTGAGGGAGAAGAAAGGAAGAGTATGGAGATTCAGTGATTGGGGTATGAGAAAGTTGGCTTACAAAATCCAGAAAGCTAATAACGCACACTACATTTTGATGAACTTCGAGATGGACGCCAAATATATCAACGAGTTGAAGACTTTGCTGGACAGAGATGAAAGAGTTATTCGACACCTAGTGATAAAGAGGGACGAAGCAATCACTGAAGATTGCCCTCCTCCTCCCGAGTTTAATACTTTTGTTGGTAACACAGATGATGAAGAAGAATCGGATGATGAAGGAGAATGGGATGATGAAGACGAGGAAGATGGATCTGATTATGATGATATTGAGGGTGGTGATGGAATTTTCATTATAGACGATGATGATTTGGAAATATCAGAGGGCCAGAAAATAGCATAA 885 0.3944 MEALFKGSSYLLPSSKPPKTITMLASNPLRFNFPNHHLSSSSSFSRQFSLQNNPRKSFSLIMNARKKDKKEDTHSFVPKSYEATGFFPESVLLKKKTVEEDGKLLPEFEDDDERKLYESLKLDVETDMDVELLRHYEIVYLIHEKHAEEVVAVNEKVQDFLREKKGRVWRFSDWGMRKLAYKIQKANNAHYILMNFEMDAKYINELKTLLDRDERVIRHLVIKRDEAITEDCPPPPEFNTFVGNTDDEEESDDEGEWDDEDEEDGSDYDDIEGGDGIFIIDDDDLEISEGQKIA* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1177 294 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 96 243 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr2g1177 294 CDD bS6 135 224 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr2g1177 294 Pfam Ribosomal protein S6 135 223 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr2g1177 294 SUPERFAMILY Ribosomal protein S6 133 233 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr2g1177 294 MobiDBLite consensus disorder prediction 229 294 - -
Mtr2g1177 294 TIGRFAM S6: ribosomal protein bS6 134 225 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr2g1177 294 Gene3D - 129 231 IPR014717 -
Mtr2g1177 294 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 96 243 - -
Mtr2g1177 294 MobiDBLite consensus disorder prediction 243 284 - -
Mtr2g1177 294 Hamap 30S ribosomal protein S6 [rpsF]. 133 226 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1177 - - gmx:100812111 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1177 2 12820100 12823012 Mtr2g1177 2 12820100 12823012 ECH