Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1176 ATGGCTCGAAAGGGTAATCAGCAGAAGAATGGAATTAATCACAGAAAAGGGGGTTCGGGTGGTGTACTTCCGGGTATGAAAGGTCATGAAGGAGGGCAGGTGAAGGTTTTTCCGGCGGAGGAACTTGCAAATGGTGGTCATGGTGTTTCACAGAAAGCATGTGAGGGTTGTTCTGCTGGTGATGACAATAACAATGAGCGAAAGTCTGAGAGGTTTTCTCGGAAAGATAAGCATGACCTGGAGGAATCATCGTCCTTTGGGAGTAATTCAGAGAATGGAAATGAAAATGTTGAAGTTCCAAAACAAGGACATCGGAATTTTCGTAGACGTAATCAAACTCAACAGAGTATCAAGAGTAGATTGAGCCATTTAGTTGAAGGTTTGCAGTTGAGAGTTTTGGTAGAAAATTCAGAGCTTGCCGATCATCCGGCTATTAGGAGATTACGGTTGTCAGTTCTTTCCATTTTTACCGCAGTTACGGAGTGGCTAATCAGGCAGAAGCCGTTATTTGCATCTATTAGAACCACCGTTTTAGAAGCTTATGCTAATTTCAGAACAAAATTTAAGCAGGCATATCCCATTGTTCTGACGTGGCTCATGCACTTTGGGAGTATAATCCTTCTATTATCAGTGTTTTGGTTGGACTGTGCCGTTCGGGGTTTTGATTCGTTTGTACGAATGGGTACAACATCCTTCTTCTCGGTTATATGGTGCAGCATATTCTCCGTGATTAGTATGATAGGGATGCTCAAGTTTCTGGTTGTCCTGGGCCTGGCTGCCTTGATTGGATTTTTTGTTGGGTTCGTGATTGCAGCTTTGGTAGTTGCTATCATTGGAGTTGTTATGTTGTGGTTTTATGGTAGCTTTTGGACAACTGCATTTATCATCATTCTAGGAGGATTGGCATTTATGTTACGTCATGAACGCGTGGCACTTCTTATCACCACTGTGTATTCTGTCTATTGTGCTTGGCTCTATGTTGGGTGGCTTCGTCTATTCTTGGCTTTTAATTTAGCTTTCATCTCGAGTGATGTTCTGATATACTTTCTCAAGAAAAACATAGATCAACAGAGTAGATCGAATCCATTTGAACAAAGAGCTGGAATGAACAGTCAACCAGGTTTTGGAAACGATGAATCAATTCCGTCTTCTTCCTCTGAAAATGGACCAGGACCATCTGCAGATCGTAATGCAGGAGTCCCCTCGACTAGTGGGGCTGATTCTGATGTAACTTCTGAAGACGAAGTTGTTCGATTGTTGCACTGCTTTGATCACTATTCAGCACTAGGCTTGACGCGCTATCAAGATATAGACGTTTCAGTACTGAAGCGGGAATATAGAAAGAAGGCAATGTTGGTACATCCTGATAAGAATATGGGAAACGAAAAGGCCGTAGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAAATGATTCCTTGAAGAGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAAATTCTTAATGTATTCAACAGATTTCAGAATGCTCCACGTAGGAATAGTAGACATGGATTCTTTTCTTCGGGATTTGGCCATTCAGACGCAGATGGTGAGGACCCATTTGGTGAATCAAGGAGAATAGCTTGCAAAAGATGTGGCGGCTTTCATCTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGTCAAGATTTTCACCAAGCCAAGGATGGTGATGGATGGGTTGAACAATCTTCTCAACCATTTCTATTTGGCTTAATTCAGAAGGTAGACACTCCTTCTGCTTACGTGTGTGCGGATAGCAAAATATTTGATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCAAATACACATAAACCAAGTTTTCATGTGAACACCAGTATAATGTCGAAACAAAATCCTGGCAAAGGAACTAGCTCTTCAACTCAAAGGGGTGGGCGGGTGCCAACTCCTCCTAATATGCCAACACCTAATTTTGAAGAAACCATGACCGAGGAAGAATTTGTCGAGTGGTTACAGAATGCAGTACAGTCAGGCGCGTTTGACAATTTCAACGGTGGCACTGCAACAGAAAGCCCATCCCCCAAATCTGGAAATGGGATGAAAAATCCTGGCACTAGCGTTGGTAGCGGCAGCAAAAGAAAGAAAAAAGGAAAAAAGCATTAA 2184 0.4231 MARKGNQQKNGINHRKGGSGGVLPGMKGHEGGQVKVFPAEELANGGHGVSQKACEGCSAGDDNNNERKSERFSRKDKHDLEESSSFGSNSENGNENVEVPKQGHRNFRRRNQTQQSIKSRLSHLVEGLQLRVLVENSELADHPAIRRLRLSVLSIFTAVTEWLIRQKPLFASIRTTVLEAYANFRTKFKQAYPIVLTWLMHFGSIILLLSVFWLDCAVRGFDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLVVLGLAALIGFFVGFVIAALVVAIIGVVMLWFYGSFWTTAFIIILGGLAFMLRHERVALLITTVYSVYCAWLYVGWLRLFLAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMNSQPGFGNDESIPSSSSENGPGPSADRNAGVPSTSGADSDVTSEDEVVRLLHCFDHYSALGLTRYQDIDVSVLKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILNDSLKRKAYDDELRREEILNVFNRFQNAPRRNSRHGFFSSGFGHSDADGEDPFGESRRIACKRCGGFHLWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLIQKVDTPSAYVCADSKIFDATEWYICQGMRCPANTHKPSFHVNTSIMSKQNPGKGTSSSTQRGGRVPTPPNMPTPNFEETMTEEEFVEWLQNAVQSGAFDNFNGGTATESPSPKSGNGMKNPGTSVGSGSKRKKKGKKH* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1176 727 ProSiteProfiles dnaJ domain profile. 424 491 IPR001623 -
Mtr2g1176 727 SMART dnaj_3 423 483 IPR001623 -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 85 99 - -
Mtr2g1176 727 PANTHER OS03G0832900 PROTEIN 1 727 - -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 685 727 - -
Mtr2g1176 727 SUPERFAMILY Chaperone J-domain 419 519 IPR036869 -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 374 410 - -
Mtr2g1176 727 PRINTS DnaJ domain signature 446 461 IPR001623 -
Mtr2g1176 727 PRINTS DnaJ domain signature 463 483 IPR001623 -
Mtr2g1176 727 ProSitePatterns Nt-dnaJ domain signature. 468 487 IPR018253 -
Mtr2g1176 727 Coils Coil 461 481 - -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 61 84 - -
Mtr2g1176 727 Pfam Cleavage inducing molecular chaperone 533 631 IPR032843 -
Mtr2g1176 727 Gene3D DnaJ domain 417 505 IPR036869 -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 685 716 - -
Mtr2g1176 727 Pfam DnaJ domain 424 488 IPR001623 -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 631 655 - -
Mtr2g1176 727 PANTHER OS03G0832900 PROTEIN 1 727 - -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 631 665 - -
Mtr2g1176 727 MobiDBLite consensus disorder prediction 1 113 - -
Mtr2g1176 727 CDD DnaJ 424 480 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1176 Mtr-Chr2 12802537 12809221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1176 1 699 Miscellaneous Gene Families AT5G49580 52.266 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1176 K09534 - gmx:100789594 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1176 2 12802537 12809221 Mtr2g1176 2 12802537 12809221 ECH