Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1175 ATGGATAAATCAGGAGATGGGATTTTTCCAGATGAGGTTGTGATGCAGATTCTTGCAAGATTACCTGTGAAATCGCTTTTCAGAAGCAAAACTGTGTGCAAATTATGGTATAGGTTGACTTTGGATAAGTATTTTATTCAATTATACAATGATGTTTCTAGGAAGAATCCTATGATTCTTGTTGAGATTTCAGATTCATTGTTAGAATCCAAATCTAGTTTGATTTGTGTTGATAATTTAAGGGGTGTTTTCGAATTTTCGCTGAATTTTTTGAATGATAGAGTTAAGGTTCGCGCGTCTTGTAATGGATTGTTGTGTTGTTCTAGTATTCCGGATATGGGGGTTTATTATGTTTGCAATCCGGTTACGCGTGAGTTTAGGTTGCTTCCTAAGAGTAGGGAGAGGCCCGTGACTCGGTTTTATCCTGATGGTGAAGCTACTTTGGTTGGTTTGGCTTGTGATTCGGCGTTTCAGAAGTTCAATGTTGTTCTTGCGGGTAGTCATAGGACGTTTGGTCATAGGCCGGATGGGAAGTTTATATGTTTAGTGTTTGATTCAGAGTTGAATAAATGGAGGAAGTTGATTTCTTTTCAGGATGAGCATTTTACTCATATGAATAAAAATCAAGTTGTTTTTGTCAATAATGCTTTGCATTGGTTGACCGTTAGCTCGAGTTATATACTCGTGCTTGATTTGAGTTGTGATATTTGGAGGAAGATGTCATTGCCGTATGACCCGATTTATGGAGCGGGAAACAGGACTTATCTGTTGGAATTAGATGGTTGTCTTTCTGTGATTCAGATCTCGGAAGCGTGGATGGTTATATGGGTGCTGAAAGATTACTGGAAAGATGAATGGTGCATTGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTCCCGATCAGTCAGACAACTGAATATGTTTTCTTGGCAACTCATAAGCAGGTTTTGGTGTATCAACGCAGGAGTCAAGTTTGGAAAGAAATGTATTCTGTGAAGTATAGCTCAACACTTCCGTTATGGTTTTCAGCGCATGCGTATCGCAGCACAATGTTCTCGTGTAACTGA 1086 0.3941 MDKSGDGIFPDEVVMQILARLPVKSLFRSKTVCKLWYRLTLDKYFIQLYNDVSRKNPMILVEISDSLLESKSSLICVDNLRGVFEFSLNFLNDRVKVRASCNGLLCCSSIPDMGVYYVCNPVTREFRLLPKSRERPVTRFYPDGEATLVGLACDSAFQKFNVVLAGSHRTFGHRPDGKFICLVFDSELNKWRKLISFQDEHFTHMNKNQVVFVNNALHWLTVSSSYILVLDLSCDIWRKMSLPYDPIYGAGNRTYLLELDGCLSVIQISEAWMVIWVLKDYWKDEWCIVDKVSLRCIRGMVPGIFPISQTTEYVFLATHKQVLVYQRRSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1175 361 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Mtr2g1175 361 Pfam F-box-like 10 43 IPR001810 GO:0005515
Mtr2g1175 361 Gene3D - 9 44 - -
Mtr2g1175 361 TIGRFAM F_box_assoc_1: F-box protein interaction domain 100 325 IPR017451 -
Mtr2g1175 361 SUPERFAMILY F-box domain 8 58 IPR036047 GO:0005515
Mtr2g1175 361 SMART fbox_2 9 49 IPR001810 GO:0005515
Mtr2g1175 361 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 359 - -
Mtr2g1175 361 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1175 Mtr-Chr2 12771576 12773218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1175 - - gmx:100811223 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1175 2 12771576 12773218 Mtr2g1175 2 12771576 12773218 ECH