Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1171 ATGTCCTTCAATACCGATCCTTCAAATCCTTCAATATCGAAAGAAAGAGATTGGAAGAATATTCTTCAACAAACTCAATTGGAAGAGAACTCTGATGATCTCAGGATTCAGGTCAAATACATGTTCTTCGATGGTGATCATTTGAATCATAAATGCGTTGATTTGGGAGGTTGTAGTTGCAAGGAAATTGATAGGAAGAATCTTCTTGAACAAACACAATTGGAACGGAATAAACGCTTGTGGTTGCGTGAGCAGAACTCTGCTGCACTTCAGATTCAGAAATGCTTCAGAGCGAAAAAAGTTGTCAAAACGGAACAGTCTAAGTTGCGACAGAAATTCCTTAATATCTATGGAAAAAACTGCCTTAATGTTGACAGGAAAGCTTTTGGTCCAGATTCTGATTTCCTCCGCCAGTTCCTATATTTCTTTAATGCAGAAAACCATGATGATTTTTTAGTTCTTGTGCAAATTTGCCGATTACTTCTACAGTTTGTTCAAGAGAGTGGGGATGCTGTGAAACTTTTTGCTGGTGAGAGTTACTCGTCTGTATGTGCTTTCGTGAACTACCGAGTGAAGAAACTTGCATATAATTGTATTCGTGTAGTACATCATAATAGAAATCAGTTGAAGGATCAACAACTTTTATTGACTCCGAAGGAGTCTAATGCATCAGCTTTTCCTCTATTGGAGATTATAGTACTGTTGATAGATCTCAAACTGCCATGGAGCTGTAAGATAGTAGGATATTTCTCTCAAAACAATGGATTCGTTCTACTTAGACAGATTATTCTTACAGGAAAGGATAATGCAGAAAAATGTATAGGATCATCTTTGGAACGTGTGCTTACAGGTGTAATGTGTCACATTGGTCAGAAACCATGTATTTGCTCAGACATTGATCCAAGTATTAGCTACTCATCGCAGATCCTTACAATTCCACTCTTATGGCATTGTTTTCCCAACTTAAGACAGGTTTTTGCAAGACAAGGCATGATCCAACATCACATTCATCAAATGGCAACATTTGTGCCAAATCTGATCAGTTTTCTACCTAAGGATGTATCAGATGAATTTCCTACCTATGCCTGTCTTCTTGGAAATATATTAGAAATTGGTGGAATTGCTTTGTCTCAACCTGACTGTTCATTCGATATGGCCATAGACCTTGCAGCTGTTACTACAGTTTTACTGGAGGCACACCCCTCTTTGACAAGATCTCATAGTAGAGAAAATTCTATGATTGCTGAGGATGATATGACTGGCGACGATGAAGTCATGGAAGTAGCTCTGGATAGGAAATTGGATCAACAAATTTGTAATTCTATTGATACTCGCTTCCTTCTGCAACTGACAAATATATTATTCAGAGATATTTCAGCTGCCAATGGGCCAGATGATATGGAGGTTGCAGCCGTTGGTGCAGTTTGTGGGTTGTTATATGTTATCTTGAACACATTGCCACTTGAAAGTATTATGACTGTGCTTGCCTACAGAACTGACCTTGTTCCTATGCTTTGGAAATTTATGAAACGGTGCCAAGCGAATAAAAAATGGTCATCTTTGTCTAAGCAGTTATCATACCTCTCAGGGGATGCCCCTGGTTGGCTATTACCTCTTGGTGTATTCTGTCCTGTCTACAAGCATATGCTTATGATGGTTGGTAATGAGAAATTTTATGAGCAGGAGAAACCCCTATCACTGAAGGATATGAGCAGCCTCATCATTCTATTGAAGCAGGCTCTGTGGCAGCTACTGCAGGTAAATCATACCTCATCTGCTAATTCAGTTAGATCTATTCCAGTTAGGACAAGCAGTAAAAAGCTGTCTATTGAAGCCATTCAACAGAGGGTTAGCATAGTCATCTCTGAACTCCTGTCCCAGCTCCACGATTGGAACAACAGACGACAGTTTACATCCCCCAGTGATTTCCATGCTGACGGGGTTAATGGATTTTTCATATCTCAGGCTTCTATAGCAAATACACGAGCAAATAAAATTGTAAAGAAGGCCCCTTTCCTGATACCACTTGCAAAGCCTCAACAAGCTGCAGTTAGACAAACACATGGATTTCACTCTGTAGCTGCAGTTAGGCAAAGACATGCTCAGTCTTCCATTTTTAGAAAGCAGTTCAGAATAAGGCGTGATCATATTTCGGAAGATGCTTATAATTCAAAGTCTCAACCAGCTGCAGCTAGGCAAAGACATGGATCTCAGACTGTATTTGCTGGAAATTGGTTCATGGCAAGGTATGATCATACTTTGGAAGATTCTGTTGAACAGTACATTGTAAGGCAAGTACATGAAGGATCAGAAAGGATTGACACTCCCGTGATGGTTCAGCATCGTGAGGAGAACTCTCCAATCTTGGAACCTATGTCTCAGCATACCTCCCCACCACCGCCACCGATGCATGTCATGAATGTTGAGAATGATGACCCACAACATGAAACTTCTGGTGAAAACCAAAACCAGTCAAACATTCTTGATGAACCGATTGTTGAAACATATGATGATGCCTGA 2520 0.4 MSFNTDPSNPSISKERDWKNILQQTQLEENSDDLRIQVKYMFFDGDHLNHKCVDLGGCSCKEIDRKNLLEQTQLERNKRLWLREQNSAALQIQKCFRAKKVVKTEQSKLRQKFLNIYGKNCLNVDRKAFGPDSDFLRQFLYFFNAENHDDFLVLVQICRLLLQFVQESGDAVKLFAGESYSSVCAFVNYRVKKLAYNCIRVVHHNRNQLKDQQLLLTPKESNASAFPLLEIIVLLIDLKLPWSCKIVGYFSQNNGFVLLRQIILTGKDNAEKCIGSSLERVLTGVMCHIGQKPCICSDIDPSISYSSQILTIPLLWHCFPNLRQVFARQGMIQHHIHQMATFVPNLISFLPKDVSDEFPTYACLLGNILEIGGIALSQPDCSFDMAIDLAAVTTVLLEAHPSLTRSHSRENSMIAEDDMTGDDEVMEVALDRKLDQQICNSIDTRFLLQLTNILFRDISAANGPDDMEVAAVGAVCGLLYVILNTLPLESIMTVLAYRTDLVPMLWKFMKRCQANKKWSSLSKQLSYLSGDAPGWLLPLGVFCPVYKHMLMMVGNEKFYEQEKPLSLKDMSSLIILLKQALWQLLQVNHTSSANSVRSIPVRTSSKKLSIEAIQQRVSIVISELLSQLHDWNNRRQFTSPSDFHADGVNGFFISQASIANTRANKIVKKAPFLIPLAKPQQAAVRQTHGFHSVAAVRQRHAQSSIFRKQFRIRRDHISEDAYNSKSQPAAARQRHGSQTVFAGNWFMARYDHTLEDSVEQYIVRQVHEGSERIDTPVMVQHREENSPILEPMSQHTSPPPPPMHVMNVENDDPQHETSGENQNQSNILDEPIVETYDDA* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1171 839 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 178 286 IPR044611 GO:0000209|GO:0061630
Mtr2g1171 839 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 41 138 IPR044611 GO:0000209|GO:0061630
Mtr2g1171 839 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 278 742 IPR044611 GO:0000209|GO:0061630
Mtr2g1171 839 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL6 41 138 - -
Mtr2g1171 839 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL6 178 286 - -
Mtr2g1171 839 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL6 278 742 - -
Mtr2g1171 839 MobiDBLite consensus disorder prediction 789 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1171 Mtr-Chr2 12571476 12592921 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1171 K10589 - gmx:100787467 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1171 2 12571476 12592921 Mtr2g1171 2 12571476 12592921 ECH