Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1168 ATGGTGAAGGTTCGTATGAACACGGCGGATGTGGCCGCCGAAGTGAAATGTCTCCGACGTTTAATCGGAATGCGATGTTCCAATGTTTATGATCTCACTCCCAAGACGTACGTTTTCAAGCTTATGAATAGTAGTGGAATGACTGAATCTGGTGAAAGCGAGAAGGTTTTGTTGCTCATGGAAAGTGGTGCTAGATTGCACACTACTGTCTATATGCGAGACAAAAGCAACACTCCTTCTGGTTTTACACTTAAATTGAGGAAACATATTCGAACTAGAAGGCTTGAGGATGTGCGACAACTTGGGTATGATCGGATTGTTCTATTTCAATTCGGACTTGGGGAGAATGCAAACTATGTTATACTAGAGCTATATGCTCAAGGCAACGTCATTCTCACGGATTCTAGTTTCACTGTTTTGACTCTACTTCGATCTCACAGGGATGATGATAAGGGGCTTGCAATCATGTCACGCCATCGTTATCCTGTAGAAAGTTGTCGAGTTTTTGAGCGAACAACTACAGCAAAGCTGCAGACAGCCCTAACATCTTCCAAGGAAGATGACAATGATGAGGCTGTTAAGGCCAATGGAAATGGAACTGATGTTTCCAATGTAGAAAAAGAGAAGCAGGGATCCAAAAAAAGTGGGAAGTCATATGCCACTTTGAAAATTATCCTTGGGGAGGCACTCGGTTATGGACCTGCACTGTCTGAGCACATGATATTAGATGCCGGTTTAATCCCCAATGAAAAAGTATCGAAAGATAAAGTGTGGGATGACGCCACTGTTCAGGCTTTGGTCCAAGCTGTTGCAAAGTTCGAAGATTGGATGCAGGATATCATTTCAGGTGAAATAGTTCCAGAAGGATACATTTTGATGCAAAACAAAGTTTTGGGGAAGGATTCTTCTGTATCACAACCAGAAAGTCTTAAACAGATCTATGATGAGTTCTGCCCCATCTTACTTAACCAGTTTAAGTCAAGGGATCATACAAAGTTTGAGACCTTTGATTTAGCCTTGGATGAATTCTACAGCAAAATTGAGAGTCAAAGGTCTGAACAACAGCACACAGCCAAAGAGAACTCAGCTCTTCAGAAACTTAATAAGATACGCAACGATCAGGAAAATCGAGTGCACACTCTGAGGAAAGAAGCTGATAACTGTATTAAAATGGCAGAATTGATAGAATATAACTTGGAAGATGTAGATGCTGCTATATTAGCTGTTCGTGTATCTCTTGCTAAGGGTATGAGTTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGTCTAATTGACAAGCTTCATCTTGAAAGAAATTGCATGACTTTACTGTTGAGCAACAATCTCGACGAAATGGATGACGATGAGAAGACACTCCCTGCAGATAAGGTCGAAGTTGATTTAGCTCTCTCGGCACATGCCAATGCTCGGAGGTGGTATGAACTGAAGAAAAAACAGGAGAGCAAACAGGAAAAGACTATAACTGCCCATGAAAAAGCTTTTAAAGCTGCGGAGAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCGCATATGCGCAAAGTTCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAATTATTTGGTTATCAGTGGACGTGATGCCCAGCAAAATGAGATGATAGTAAAGCGTTATATGTCAAAAGGAGATCTGTATGTGCATGCTGAACTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAACCTATGCAGCCAGTTCCACCACTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACCAGTGCCTGGTGGGTTTATCCTCATCAAGTTAGTAAAACTGCTCCTACTGGGGAATATCTGACAGTAGGGAGTTTCATGATACGAGGAAAGAAAAATTATCTTCCACCACACCCTCTTATTATGGGTTTTGGCCTGCTATTTCGCTTGGATGAGAGTTCATTGGGATCACATTTAAATGAAAGGAGGGTAAGAGGGGAGGAGGAAACAATAGATGATAATGTAGAAACTGGCCCTGTCGAAGAACAATCTGATTCAGAGTCTGAGAAGAATGTTGCTGATGGAGAAACTGCTGCAGACTCGGAAAGGAATGGTAATCTATCTGCAGATTCACCCATACCCTCAGAAGATTTGCTTGCAGACACGTCTCAAACTAGTTTGGCTGCAATTAATGCCAAAACTACAGTTTCAGATGATTTTTCTGCAAAAGATCCAAGTACAAAAAATATGCTTGATAGTGAAAAATTATCTGACTTCAGTGGAAATGGCTTGGCATCTGTCTCCCCTCAGCTTGAGGAAATTCTTGACCGAGCTCTGGGACTTGGATCTGTTGCCAAATCAAATAAAAGTTATGAAGCTGAGAATACTCAGCTTGATTTAAGCAGTGAGAACCATAACGAATCAAGCAAACCTGCAGTAAGGGATAAACCGTATATATCAAAAGCTGAGAGAAGAAAGCTTAAAAATGAACCGAAACATGGAGAAGCACATCCAAGCGATGGAAATGGAAAGGACAAATCAAAGTTAAAAGATATTTCTGGTGATCTGCATGCAAAAGATGCTGAAAATTTGAAGACCGGCGGTGGTAAAAAAATCAGCCGTGGACAAAAGGGAAAACTTAAGAAGATGAAGGAGAAGTATGCTGACCAAGACGAGGAAGAAAGGAGCATCCGAATGTCGTTATTGGCTTCTTCTGGAAAACCAATCAAGAAGGAAGAGACATTACCTGTAATTGAAACCTCGGACAAAGGGAAAAAATCTGACAGTGGTCCTATAGATGCTCCGAAAATATGTTATAAGTGTAAGAAGGTAGGTCATTTATCTCGGGATTGTAAGGAGCAACCAAATGATCTGTTGCACAGTCATGCAACCAGTGAAGCTGAAGAAAATCCAAACATGAATGCTTCAAACTTGTCCTTAGAAGATAGAGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTGAATGATGTGGATTACTTAACAGGAAATCCACTCCCAAATGACATTCTCTTATATGCTGTTCCCGTTTGTGGTCCATACAATGCAGTTCAATCTTACAAGTATCGAGTGAAGATAATTCCTGGACCTGTGAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACCTATTCAGCCACATGTCAGAAGCAACAAATCGAGAAAAGGAGTTGATGAAAGCCTGTACTGATCCTGAATTAGTTGCTTCAATTGTTGGTAATGTGAAGATAACAGCAGCTGGACTTACTCAATTGAAACAAAAACAAAAGAAAGGCAAAAAGAGCAGTGCCAAACAAGGGAGTTAG 3411 0.4093 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLTPKTYVFKLMNSSGMTESGESEKVLLLMESGARLHTTVYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIVLFQFGLGENANYVILELYAQGNVILTDSSFTVLTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTTAKLQTALTSSKEDDNDEAVKANGNGTDVSNVEKEKQGSKKSGKSYATLKIILGEALGYGPALSEHMILDAGLIPNEKVSKDKVWDDATVQALVQAVAKFEDWMQDIISGEIVPEGYILMQNKVLGKDSSVSQPESLKQIYDEFCPILLNQFKSRDHTKFETFDLALDEFYSKIESQRSEQQHTAKENSALQKLNKIRNDQENRVHTLRKEADNCIKMAELIEYNLEDVDAAILAVRVSLAKGMSWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPADKVEVDLALSAHANARRWYELKKKQESKQEKTITAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPMQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNYLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEETIDDNVETGPVEEQSDSESEKNVADGETAADSERNGNLSADSPIPSEDLLADTSQTSLAAINAKTTVSDDFSAKDPSTKNMLDSEKLSDFSGNGLASVSPQLEEILDRALGLGSVAKSNKSYEAENTQLDLSSENHNESSKPAVRDKPYISKAERRKLKNEPKHGEAHPSDGNGKDKSKLKDISGDLHAKDAENLKTGGGKKISRGQKGKLKKMKEKYADQDEEERSIRMSLLASSGKPIKKEETLPVIETSDKGKKSDSGPIDAPKICYKCKKVGHLSRDCKEQPNDLLHSHATSEAEENPNMNASNLSLEDRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNAVQSYKYRVKIIPGPVKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVASIVGNVKITAAGLTQLKQKQKKGKKSSAKQGS* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 830 889 - -
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 811 829 - -
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 723 739 - -
Mtr2g1168 1136 SMART c2hcfinal6 959 975 IPR001878 GO:0003676|GO:0008270
Mtr2g1168 1136 PANTHER - 3 1123 - -
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 705 719 - -
Mtr2g1168 1136 ProSiteProfiles Zinc finger CCHC-type profile. 960 975 IPR001878 GO:0003676|GO:0008270
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 180 212 - -
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 681 739 - -
Mtr2g1168 1136 Pfam NFACT N-terminal and middle domains 218 523 - -
Mtr2g1168 1136 Pfam NFACT N-terminal and middle domains 10 161 - -
Mtr2g1168 1136 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 811 917 - -
Mtr2g1168 1136 Pfam NFACT protein C-terminal domain 1020 1112 IPR021846 -
Mtr2g1168 1136 Pfam NFACT protein RNA binding domain 541 652 IPR008532 -
Mtr2g1168 1136 Coils Coil 364 384 - -
Mtr2g1168 1136 Pfam Zinc knuckle 959 975 IPR001878 GO:0003676|GO:0008270
Mtr2g1168 1136 Gene3D - 953 980 - -
Mtr2g1168 1136 SUPERFAMILY Retrovirus zinc finger-like domains 945 978 IPR036875 GO:0003676|GO:0008270
Mtr2g1168 1136 MobiDBLite consensus disorder prediction 760 785 - -
Mtr2g1168 1136 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1123 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1168 K24971 - gmx:100807437 1840.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1168 2 12527647 12537686 Mtr2g1168 2 12527647 12537686 ECH