Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1167 ATGGCCATGGCGTCTGTAGCTCAACAACTGACCAGCACAAAATGGAGTCCCCTCCTATGTAAACCAACAACAACACAAACCCATAAACAAAGACGCCCTGGTATTGTATGTTCCATTGCAATTAGTAGCGCCAATAACAAAGAAAGAGCAAAGCTTAAAGAGCTTTTTTATAATGCTTATGAACGTTGTCGTAATGCTCCAATGGAAGGTGTTTCGTTTACTCTTGATCAGTTTACAGAAACTCTTGAAAAATATGATTATGAGTCTGAAATTGGTACCAAGGTTAAGGGCACTGTGTTTGGCACCGAGACCAGTGGAGCTTTTGTTGACATTACTTCAAAGTCCACGGCTTACTTGCCGCTATATGAGGCGAGCCTCTACAAACTTAGGCATGTAGAAGAAGCAGGCATATTTCCTGGCGTGAAAGAGGAATTTGTAATTGTTGGTCAAAATGAAATTGATGATGGTATGATCTTGAGTTTAAGAGATATCCAGTTTGAGCTTGCATGGGAAAGGTGTAGACAACTTCAAGCAGAAGATGCTGTTGTCAAGGGTAAGATTATTGATGCAAATAAAGGTGGTGTGGTGGCTGAAGTTGAAGGCCTTAAGGGATTTGTTCCATTCTCACAGATGTCAACGAAATCACCGGGAGAAGAGATTATTGAGTTTGAGGTTCCTCTAAAGTTTGTGGAGGTGGACCAGGAACAAGCTAGACTTGTCCTTAGCCACCGCAAAGCCGTAGCCGGCATCCAAGGACAACTAGGAATTGGATCAGTTGTCACTGGCACTGTGCAAAGCCTAAAGCCATATGGTGCCTTTATCGACATTGGTGGTGGAATCAGTGGCCTTCTTCATGTCAGTCAAATTAGTCACGATCGTATATCAGATATTGTAACTGTTCTTCAACCTGGTGATACTCTGAAGGTGATGATCTTAAGTCATGACCGGGAGAGAGGCCGTGTAAGTCTTTCCACAAAGAAGTTGGAACCTACACCTGGAGATATGATCCGTAATCCAACGCTTGTATTCGAGAAGGCGGAGGAGATGGCTCAGACATTCAGACAGAGAATAGCGCAAGCAGAAGCCATGGCTCGTGCTGATATGCTTAGGTTCCAGCCAGAGAGTGGATTAACTCTCAGCAGCGACGGGATCTTAGGACCACTTGGTTCAGACTTGCCGCCAGAGGGACTGGATCTGAGTGAGATACCCCCAGCTGAAGAAGAATATTGA 1230 0.4439 MAMASVAQQLTSTKWSPLLCKPTTTQTHKQRRPGIVCSIAISSANNKERAKLKELFYNAYERCRNAPMEGVSFTLDQFTETLEKYDYESEIGTKVKGTVFGTETSGAFVDITSKSTAYLPLYEASLYKLRHVEEAGIFPGVKEEFVIVGQNEIDDGMILSLRDIQFELAWERCRQLQAEDAVVKGKIIDANKGGVVAEVEGLKGFVPFSQMSTKSPGEEIIEFEVPLKFVEVDQEQARLVLSHRKAVAGIQGQLGIGSVVTGTVQSLKPYGAFIDIGGGISGLLHVSQISHDRISDIVTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLDLSEIPPAEEEY* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1167 409 ProSiteProfiles S1 domain profile. 257 326 IPR003029 GO:0003676
Mtr2g1167 409 Coils Coil 343 363 - -
Mtr2g1167 409 PRINTS Ribosomal protein S1 signature 95 111 IPR035104 -
Mtr2g1167 409 PRINTS Ribosomal protein S1 signature 270 289 IPR035104 -
Mtr2g1167 409 PRINTS Ribosomal protein S1 signature 309 327 IPR035104 -
Mtr2g1167 409 SMART S1_6 255 326 IPR022967 -
Mtr2g1167 409 SMART S1_6 178 244 IPR022967 -
Mtr2g1167 409 SMART S1_6 90 162 IPR022967 -
Mtr2g1167 409 SUPERFAMILY Nucleic acid-binding proteins 82 187 IPR012340 -
Mtr2g1167 409 Pfam S1 RNA binding domain 256 326 IPR003029 GO:0003676
Mtr2g1167 409 Pfam S1 RNA binding domain 178 244 IPR003029 GO:0003676
Mtr2g1167 409 PANTHER 30S RIBOSOMAL PROTEIN S1 22 407 - -
Mtr2g1167 409 CDD S1_RPS1_repeat_ec2_hs2 180 244 - -
Mtr2g1167 409 Gene3D - 251 330 IPR012340 -
Mtr2g1167 409 SUPERFAMILY Nucleic acid-binding proteins 175 247 IPR012340 -
Mtr2g1167 409 Gene3D - 173 250 IPR012340 -
Mtr2g1167 409 PANTHER 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC 22 407 - -
Mtr2g1167 409 MobiDBLite consensus disorder prediction 382 409 - -
Mtr2g1167 409 CDD S1_RPS1_repeat_hs4 257 326 - -
Mtr2g1167 409 Gene3D - 74 172 IPR012340 -
Mtr2g1167 409 ProSiteProfiles S1 domain profile. 180 244 IPR003029 GO:0003676
Mtr2g1167 409 SUPERFAMILY Nucleic acid-binding proteins 253 332 IPR012340 -
Mtr2g1167 409 ProSiteProfiles S1 domain profile. 92 162 IPR003029 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1167 K02945 - gmx:100806905 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1167 2 12521955 12525699 Mtr2g1167 2 12521955 12525699 ECH