Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4342 ATGGCGAGTCCGGAGGAGGTTAGGTTGGATCAACTCCCTCACGCTCTGCTTGCCACCATCATGACCAAACTCGACGTCGCTTCCATCTGTTCATTAGCCACCACCGCCTCCACCTTCCGCTCTTGCGCCAAACACATCCTTTCCTTCCTCCCTAATTTCCATCTCATCGACGTTGCGCCATCTGGAAACTTACTCACGCCGTTGCTGCCACGTAATCCGTATCTTAAGAGTCTCAAAGTTGATTGTGATCGTCTTGATGATTCTTCAATATCTCTATTGGTCAAACCCTCACTTCATGAGCTTTCTCTGTATAATTGTTCTGATTTCAGTGGGAAACTTCTTTCTGAGATCGGTACTCAATGCAAGGACCTAAGATCTCTTTACTTGGGTTCGGTTGCAGAAAAAAGAGGGAGGTCAATTCACATATCTGATCTGGAGGAATTACTCACTGGTTGCTCCCAGTTAGAAGTTTTGATTTTGATGTTTGATGTCTCTCTCTTTCTACGTCATAACTTGGCTCGAGTTTGGGCTTCTGCGTCTGAGAAACTTACTTCTCTTGAGATTGGATATATTTCTTCAGTTACAGTGATCGAACTGTTCAGTTCAAATTTGGGATCTCATCAGCCCCTTAATCCTATTCAACCATCCATACTTCCTGGAATTCAGAAATTGTGTCTTTCTGTGAACTATATAACAGATGCAATGGTTAACACAATATCCAAAGGTCTCGTCTTTTTGACCCATTTGGATCTTCGTGATGCACCATTTGTTGAACCAAGAATTACATTTGATCTAACCAACGCTGGTCTTCAGCAAATTAATCAACATGGGAGATTGAAACATCTTTCATTGATCCGAAGCCAAGAGTTCATAATTTGTTACTTTCGAAGAGTGAATGATCTAGGATTACTTTTAATGGCTGATAAGTGTGCAAACATGGAGAGCATATGTCTTGGCGGCTTTTGTCGTGTCACAGACACAGGAATCAAAACTATCCTGCATTCTTGCTCTCGTCTATACAAACTTAAGGTCACTCATGGGACTCAATTAACTGATCTAGTTTTTCATGATATCTCTGCAACATCCCTTACTTTAACACATGTGAGCTTAAGATGGTGCAAGCTCTTAACCAATCATTCAGTTTTTAGTTTGACATCAAACAAGGAACTTAAAGTTCTTGACTTGAGAGATTGTAGAAGCCTTGGGGATGAAGCTCTCCGAGCCATTGGCATACTTTTGAGACTAAAGATTTTACTTATTGATGGCTCTGATATAACTGATGCTGGACTTTCATACCTACGGTCTACCGTTATTAATTCACTGTATGCATTGTCTCTTCGAGGGTGCAAGAGGCTCACTGATAAATGCATAACAGTTCTATTTGATGGGTGTGGCAAGTTGGAATTAAGAGACTTGGATCTATCCAATCTTCCTAACCTCTCAGATAATGGTGTTCTAGAGTTGGCAAAAAGCCGAATTCCTTTTTTGGATCTCCGAATGCGACAATGCCCTCTAATTGGCGATACCTCGATCATGGCTTTAGCTTCAATGATGACTGATGATGCTGGATGGTATGAAAGCGGTCTGCGCTTGTTGGATATGTATAACTGTGGTGGCATTACGCCACTTGCTTTTCGCTGGCTAAAGAAACCGTATTTTCCAAGGCTTAAATGGTTGGGAGTGACTGGAAGTGTTAATAGAGACATGGTAGATGCTTTAGCTAGAAGTAGACCTTTCTTGTATGTGGCATGCAATGGTGAGGAACTTGGGCCCGACCCTTGTGATATGTCAGATGGCTTATATACACATGATTATGACGAGGTGGATGAATTTGAGCAGTGGCTTCTCGAAGCTGATATTGATGAAGCTGATATTGAGAATGATGATGAAGAAATGGTCGATGCTGAAAATGAGGAAGAACCGATCATGTAG 1932 0.4172 MASPEEVRLDQLPHALLATIMTKLDVASICSLATTASTFRSCAKHILSFLPNFHLIDVAPSGNLLTPLLPRNPYLKSLKVDCDRLDDSSISLLVKPSLHELSLYNCSDFSGKLLSEIGTQCKDLRSLYLGSVAEKRGRSIHISDLEELLTGCSQLEVLILMFDVSLFLRHNLARVWASASEKLTSLEIGYISSVTVIELFSSNLGSHQPLNPIQPSILPGIQKLCLSVNYITDAMVNTISKGLVFLTHLDLRDAPFVEPRITFDLTNAGLQQINQHGRLKHLSLIRSQEFIICYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGIKTILHSCSRLYKLKVTHGTQLTDLVFHDISATSLTLTHVSLRWCKLLTNHSVFSLTSNKELKVLDLRDCRSLGDEALRAIGILLRLKILLIDGSDITDAGLSYLRSTVINSLYALSLRGCKRLTDKCITVLFDGCGKLELRDLDLSNLPNLSDNGVLELAKSRIPFLDLRMRQCPLIGDTSIMALASMMTDDAGWYESGLRLLDMYNCGGITPLAFRWLKKPYFPRLKWLGVTGSVNRDMVDALARSRPFLYVACNGEELGPDPCDMSDGLYTHDYDEVDEFEQWLLEADIDEADIENDDEEMVDAENEEEPIM* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4342 643 Coils Coil 618 638 - -
Mtr1g4342 643 Gene3D Ribonuclease Inhibitor 414 588 IPR032675 -
Mtr1g4342 643 SUPERFAMILY F-box domain 5 45 IPR036047 GO:0005515
Mtr1g4342 643 SUPERFAMILY RNI-like 47 352 - -
Mtr1g4342 643 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 12 563 - -
Mtr1g4342 643 SUPERFAMILY RNI-like 297 563 - -
Mtr1g4342 643 SMART LRR_CC_2 218 242 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 388 412 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 362 387 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 526 551 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 466 491 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 493 517 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 95 120 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 310 335 IPR006553 -
Mtr1g4342 643 SMART LRR_CC_2 438 463 IPR006553 -
Mtr1g4342 643 Pfam Leucine Rich repeat 387 409 IPR001611 GO:0005515
Mtr1g4342 643 Gene3D Ribonuclease Inhibitor 56 413 IPR032675 -
Mtr1g4342 643 PANTHER UNCHARACTERIZED 12 563 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4342 - - gmx:100789353 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4342 1 55141896 55145166 Mtr1g4342 1 55141896 55145166 ECH