Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4333 ATGGAAGAAAAAGAAGGAAGAAACATTAGAGCTGAGAGGATGACGCTGAGATTTCAACAATGTCCTCTTCCTCCTCCTCAACTCCAAACCCAGCTTCGTCTTAAAAAAAACAACACAATTCGTTGCACTCTAACGAAACAAGGGCAACGATTCCTCACAAAACTCTCAACCACCAACACCAATACCGAAAATCTCATTCGTAAATTCGTACAATCCTCACCCAAATCCGTACTACTCTCCACTCTCACTCACCTCCTCTCTCCGACCACCGCTCACCATCCCCTCTCTTCTCTCGCCCTCCCCCTTTACACAAGAATAAGTGAATCACAATGGTACACATGGAATCCAACCATCTTCGCCGATTTAATCACCCTACTCCACAAACACCAACGCTACACCGAATCCCAAACCTTAATTTCCGAAGCAACTTCAAAACTCAACAACAAAGAACGTGACATTGTTCTTTTCTATGCTAAACTCTTGGACTCACATTCCAAACGTGCTTCTCAAACCGGCTTTGATTTCGCTTATTCTCACCTCAACAATCTTCTTCGCACTTCCTCTTCAATTTACGTTAAACGCAGAGCTTCTGAATCTATGGTTAGTGGTTTGTGTGCAATGGATAAGCCTCGTGAGGCTGAGAATCTGGTTCAGGAATTTAAACGAACAGATGGTGGTGGGAAGATTCAGCTTCAACCTTCTGCTTTTGAATTCAAGTCTATTTTGTATGGATATGGAAGATTGGGTTTGTTTAATGATTTGAACAGAGTTGTTGATGAAATGGAGAATAATGGGTTTGTTATTGATACTGTTTGTTATAATATGGTTCTTTCAAGTTTTGGAATTCATGGGGAGTATGTGGAAATGGTTTCTTGGCTTACAAGGATGAGGAATTCTGGTGTTCCTTTTTCTGTTAGAACTTATAATTCGGTTTCAAATTCTTGTCCAACGGTTATGAGGAAGGTTGTGGATTTGAATGATTTGGCATTTTCGATTGAAGAGTTGTTGAATTCGTGTTTGGAAGGAGGGGAAGCTATGGTGGTTAAGGAGTTGCTTTCGTGTAATGTGCTTTTCGATGAGGTGATGGTGTGGGATTCTAAAGAGGTGAAATTGGATTTGCATGGATTTCACTTGGGTTCGGCTTATTTGGTTATGTTGCTTTGGTTGGAGGAGATGCAGAAGAGGTTGTTGAATGCTTCAAATCATGATATTCCTGCTGAAATCACTGTGGTTTGTGGGGTTGGAAAGCATAGCAATGTGAGAGGAGAATCACCGGTCAAAGTATTGGTTAAAGAGATGATGATGAAGATGAAAGGTCCACTCAGGATTGATAGGAAAAACACTGGCTGCTTTGTTGCCAAAGGTAAGGCTGTCAAAATTTGGTTATGTGAATTGAGGAAGCAATGA 1407 0.4108 MEEKEGRNIRAERMTLRFQQCPLPPPQLQTQLRLKKNNTIRCTLTKQGQRFLTKLSTTNTNTENLIRKFVQSSPKSVLLSTLTHLLSPTTAHHPLSSLALPLYTRISESQWYTWNPTIFADLITLLHKHQRYTESQTLISEATSKLNNKERDIVLFYAKLLDSHSKRASQTGFDFAYSHLNNLLRTSSSIYVKRRASESMVSGLCAMDKPREAENLVQEFKRTDGGGKIQLQPSAFEFKSILYGYGRLGLFNDLNRVVDEMENNGFVIDTVCYNMVLSSFGIHGEYVEMVSWLTRMRNSGVPFSVRTYNSVSNSCPTVMRKVVDLNDLAFSIEELLNSCLEGGEAMVVKELLSCNVLFDEVMVWDSKEVKLDLHGFHLGSAYLVMLLWLEEMQKRLLNASNHDIPAEITVVCGVGKHSNVRGESPVKVLVKEMMMKMKGPLRIDRKNTGCFVAKGKAVKIWLCELRKQ* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4333 468 ProSiteProfiles Smr domain profile. 371 456 IPR002625 -
Mtr1g4333 468 PANTHER OS02G0120000 PROTEIN 29 464 - -
Mtr1g4333 468 Pfam PPR repeat 239 266 IPR002885 -
Mtr1g4333 468 Pfam PPR repeat 271 301 IPR002885 -
Mtr1g4333 468 Pfam PPR repeat 199 222 IPR002885 -
Mtr1g4333 468 PANTHER ATPASE EXPRESSION PROTEIN 3 29 464 - -
Mtr1g4333 468 TIGRFAM PPR: pentatricopeptide repeat domain 240 270 IPR002885 -
Mtr1g4333 468 TIGRFAM PPR: pentatricopeptide repeat domain 271 302 IPR002885 -
Mtr1g4333 468 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 269 303 IPR002885 -
Mtr1g4333 468 SUPERFAMILY SMR domain-like 369 454 IPR036063 -
Mtr1g4333 468 Gene3D Tetratricopeptide repeat domain 99 360 IPR011990 GO:0005515
Mtr1g4333 468 SMART SMR_2 368 456 IPR002625 -
Mtr1g4333 468 Gene3D - 369 454 IPR036063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4333 199 314 Glycosyltransferase AT1G05670 27.586 2.06e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4333 - - cam:101506627 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4333 1 55018418 55020139 Mtr1g4333 1 55018418 55020139 ECH