Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4325 ATGTCAACCAACGTTGGTGAAAATGCTACACCAGAACAACCTTCTTCAGTTCCAAAATTAGACAAGTTGAAAAAAGTTTCAATCATACCTTTAATTTTCTTAATCTTTTATGAGGTATCAGGTGGACCATTTGGTGTGGAAGACACAGTAAGAGCAGCAGGTCCATTGTTGTCTCTTGTTGGTTTCTTAGTTTTTCCACTCATTTGGAGTGTTCCTGAAGCATTAATAACTGCTGAAATGGGTACAATGTTTCCTGAAAATGGTGGTTATGTTGTTTGGGTTTCATCTGCATTAGGCCCTTTTTGGGGTTTTCAACTTGGTTGGATGAAATGGCTTAGTGGTGTAATTGACAATGCTTTATATCCAGTTTTGTTTTTAGATTATCTTAAATCAGCTATTCCAATTATTGCTAGTGGTTTTCCAAGGATAATTGCTGTTTTAGTTTTAACTTTGATTCTTACTTATATGAATTATAGAGGATTAACAATTGTGGGTTGGGCTGCTATTTTATTGGGAATTTTTTCATTGAGTCCTTTTCTTGTTATGGGGTTAATTTCAATTCCTAGAATAAAACCAAAAAGGTGGAAGATGATGGATTTGAAGAGTGTTAAATGGGGTTTATATTTGAATACATTGTTTTGGAATTTGAATTATTGGGATTCAGTTAGTACTCTTGCAGGAGAAGTGAATAATCCTGGTAGAACTCTTCCAAAAGCACTTCTTTATGCTGTTGTTTTGGTTGTTTTGGGATATTTTTTACCTCTTTTAGTTGGAACTGGTGCTGTTGAAGTTAATAGAGAGTTATGGAGTGATGGTTACTTTTCAGAAGTTGGTAGAGTTATTGGAGGTGTTTGGTTAAGAACATGGGTTCAAGTTGCATCAGCTTTATCAAATATGGGAATGTTTGTAGCTGAGATGAGTAGTGACTCATTTCAGCTTCTAGGTATGGCTGAAAGAGGTATGCTTCCTGAATTCTTTGCAAAAAGGTCACGTTATGGAACACCTCTTATTGGTATTTTGTTCTCAGCTTCTGGTGTGGTTTTGCTTTCTTGGTTGAGTTTTCAAGAAATTGTTGCTGCTGAAAATTTCTTATACTGTTTTGGTATGCTTATGGAGTTTGTTGCATTTGTTAAGTTGAGGATAAAGTTTCCAAATGTATCTAGACCTTATAAAATACCAGTTGGGAAAATTGGAGGAGTGTTGATGTGTATAGTTCCAACACTACTAATATTTGTGGTTTTAGCTCTTGCTACTTTGAAGGTCTTTCTCATAAGTATCTCAGCTGTTATAATTGGACTTGTATTGCAGCCTTGTTTGAAATATATTGAGAGAAAAAGATGGTTTAGGTTCTCTGTTAATCCTGATCTTCCAGATATTTTTGCTGCCTAG 1389 0.3513 MSTNVGENATPEQPSSVPKLDKLKKVSIIPLIFLIFYEVSGGPFGVEDTVRAAGPLLSLVGFLVFPLIWSVPEALITAEMGTMFPENGGYVVWVSSALGPFWGFQLGWMKWLSGVIDNALYPVLFLDYLKSAIPIIASGFPRIIAVLVLTLILTYMNYRGLTIVGWAAILLGIFSLSPFLVMGLISIPRIKPKRWKMMDLKSVKWGLYLNTLFWNLNYWDSVSTLAGEVNNPGRTLPKALLYAVVLVVLGYFLPLLVGTGAVEVNRELWSDGYFSEVGRVIGGVWLRTWVQVASALSNMGMFVAEMSSDSFQLLGMAERGMLPEFFAKRSRYGTPLIGILFSASGVVLLSWLSFQEIVAAENFLYCFGMLMEFVAFVKLRIKFPNVSRPYKIPVGKIGGVLMCIVPTLLIFVVLALATLKVFLISISAVIIGLVLQPCLKYIERKRWFRFSVNPDLPDIFAA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4325 462 PIRSF AA_transporter 2 459 - -
Mtr1g4325 462 Pfam Amino acid permease 32 430 IPR002293 GO:0016020|GO:0022857|GO:0055085
Mtr1g4325 462 Gene3D Amino acid/polyamine transporter I 23 449 - -
Mtr1g4325 462 PANTHER POLYAMINE TRANSPORTER PUT1 16 460 IPR044566 GO:0022857
Mtr1g4325 462 PANTHER ACID PERMEASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 16 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4325 Mtr-Chr1 54934661 54936218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4325 12 459 Organic Solute Cotransporters AT1G31830 72.160 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4325 - - gmx:100806830 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4325 1 54934661 54936218 Mtr1g4325 1 54934661 54936218 ECH