Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4324 ATGAGTAGCCAGAAAATCACACAACCACCAAACCAAAAAACACTTCATGAATTTTTTGTGCAAGAAAAGCCTCTTTTTTCAATACCATCTTCTCCTACTTCAGGAAATGAAGAAATTCTCTCTACTGTTTCTTACTGCACCTTTGTTTTCACCTTCACTGACCCTTCAGAATCCCCTGCACAAAGAGACTCTAAAAGACTTCAACTTTCAAGGCTCATTGCTATGATGAAATCCTCAAAAAAACCAGTCCATGAGAAAGTTTTAAGACCTTTAGTATCAATGATCAAAGCCAATCTTTTCAGGCCACTTCCTCCACCTACAAATCCTTCAGCTATATCAGAATTTCTTGATGAAGAAGATCCTATTTCCATATTTTCACCTTTATGGTCACATCTACAAATAGTTTATGAAATCCTTCTTAGGCTTGTTAATAGCACAGACACCAAAATACTTAGAAATTATATGGATCATTCTTTCCTCCTTAATCTGTTAACGCTTTTCCAATCCGAAGATCCGAGGGAACGCGAAAGTTTGAAAAATGTATACCACAAGATATATTCTAAGTTCGTTTGCGACCGTTCTGCGATGAGGAAATCGATGACAGATGTTTTGTTGAACTATGTTTTTGAGACAGAAAAGCATTATGGTATTGCAGACTTGCTTGAGATATGGGGAACTATTGTTAATGGATTTACCGTGCCACTCAAGGAAGAACACAAGTTGTTTCTTATGAGAGTGTTGATTCCTTTACATAAGACTAAAGGGATGCAAGTTTATCATAGACAACTTGCTTATTGTATATCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGTGTTGTTGTTAGGGGAATTTTGAGGTATTGGCCTGTTAGTAACTGTCAGAAAGAAATTTTGTTGATTGGTGAGTTGGAAGATCTTGTAGAGAATTTGGATCCCGATCAATATCGAAAGTTGGCCTTGCCTATATGTACTCAGATTACAAAATGCATCAACAGTTGGAATTCTCAGGTAGCTGAGAGGGCACTGTATGTGTGGAACAACGAGCAGTTCTACAAAATGGCAACAACAGGAACGGTAGAAGTACTTCCGGTGATAGTACAAGGTGTTGAGAAGAACCTGAAGTTGCATTGGAGCAAGAGTGTTAGGCAGCTAACAGAAAGTGTGAAGGTGGTGGTGGAAGATATTGATCCTGATCTATATGCAAAAGCTCAAATGGATTTGAAAGTTAAAGAATCAGTGGCACATCAAGAAGATATGAATAGAAAAAAGAGATGGGAAAGAATTGAATTGGCAGCTTCTAAGAATCAATTTGTCAATCCACAACGATACATATGTGTTTCCCACTGA 1350 0.3793 MSSQKITQPPNQKTLHEFFVQEKPLFSIPSSPTSGNEEILSTVSYCTFVFTFTDPSESPAQRDSKRLQLSRLIAMMKSSKKPVHEKVLRPLVSMIKANLFRPLPPPTNPSAISEFLDEEDPISIFSPLWSHLQIVYEILLRLVNSTDTKILRNYMDHSFLLNLLTLFQSEDPRERESLKNVYHKIYSKFVCDRSAMRKSMTDVLLNYVFETEKHYGIADLLEIWGTIVNGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCISQFVQKEPMLGGVVVRGILRYWPVSNCQKEILLIGELEDLVENLDPDQYRKLALPICTQITKCINSWNSQVAERALYVWNNEQFYKMATTGTVEVLPVIVQGVEKNLKLHWSKSVRQLTESVKVVVEDIDPDLYAKAQMDLKVKESVAHQEDMNRKKRWERIELAASKNQFVNPQRYICVSH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4324 449 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 5 434 - -
Mtr1g4324 449 PIRSF PP2A_B56 4 447 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g4324 449 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 29 433 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g4324 449 Gene3D - 32 431 IPR011989 -
Mtr1g4324 449 SUPERFAMILY ARM repeat 38 413 IPR016024 -
Mtr1g4324 449 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 5 434 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4324 Mtr-Chr1 54932307 54934174 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4324 K11584 - gmx:100802007 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4324 1 54932307 54934174 Mtr1g4324 1 54932307 54934174 ECH