Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4323 ATGGCGGCGGCAGTGACACCATCGTGGCAACCACAAGAGCAAGGCTTCAAGGAGATCTGCACCTTATTGGAGCAACAAATTTCTCATTCATCTTCTTCCGCTGATAAGTCTCAGATTTGGAACCAAATTCAACAATATTCCAATCTTCCTGACTTCAACAATTACCTCATCTTCATCTTCTCCCGTGCTCAGGGAATATCTGTGGAGGTTCGACAGGCTGCAGGTTTATATCTGAAGAATAACCTGAGGAATGTATACAATTTAATGCAGCCTGAATACCAACAATACGTGAAATCAGAGTTGCTGCCTTGTCTCGGTGCAGCAGATAAACACATAAGGTCTACGACTGGAACTATTATCAGTGTTGTTGTTCAAACTGGAGGAGTTTCACAGTGGCCCGAATTATTGCAAGCCCTTGTAAGTTGCTTGGACAGTAGTGATTTAAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAAGATGTTCCCCAAATTCTTGACACCGATGTACCAGGCTTAGCAGAGCGGCCCATCAATATATTTCTTCCCAGATTATTTAGGTTTTTCCAATCACCTCACGCTTCATTAAGAAAGCTATCTTTGGGTTCTGTTAATCAATACATTATGTTGATGCCTTCTGCCTTATATGTATCCATGGATCAATATCTTCAAGGTCTGTTTATTCTTGCAAATGACCCTACTGCAGAAGTGCGGAAGTTGGTTTGCGCAGCATTTGTTCAGCTGATTGAAGTTCGCCCGTCTATCTTGGAGCCACATCTAAGGAATGTGATCGAGTATATGTTGCAAGTCAACAAGGACGCAGATGAAGAAGTGGCTCTCGAATCGTGTGAATTTTGGTCTGCATATTGTGATGCTCAAATGCCACCAGAAAACTTGAGAGAATTCTTGCCCCGTCTTATTCCAATATTGTTGTCAAACATGGCTTATGCAGATGATGATGAATCGCTCATTGAAGCCGAGGAAGAGGGTTCTCAACCTGATCGAGATCAGGATCTTAAACCTCGATTTCATGTATCAAGGTTTCATGGATCAGATGATGCAGAAGATGATGATGATGACGATGTTGTCAACACATGGAATTTACGGAAATGTAGTGCAGCTGCTCTTGACATTCTCTCAAACGTCTTTGGAGATGAAATCCTTCCTACTCTGATGCCTATTGTTGAGGCCAAGTTGTCAACCGTCGGAGATGATGGTTGGAAAGAAAGGGAAGCTGCTGTCTTGGCACTTGGTGCCATAGGCGAGGGGTGCATCAATGGTCTTTATCCTCATCTGCCAGAGATTGTGGCATTTCTTATCCCTCTTCTTGATGATAAGTTTCCCCTGATACGAAGTATTTCATGCTGGACAGTATCTCGGTTTAGCAAATTTATTATTCAGGGTATCGGGCATCCCAAGGGTTACGAACAATTTGATAACGTTCTTATGGGTCTTCTTCGAAGAATTTTGGATGATAATAAGCGTGTACAGGAAGCCGCTTGTTCTGCTTTTGCAACACTCGAAGAGGAGGCTGCTGAAGAGCTGGCACCGCGCTTGGAAATAATATTAAAGCACCTGATGGTTGCATTTGGGAAATATCAGAGGCGAAACCTCAGAATTGTTTATGATGCTGTTGGAACTTTAGCTGAAGCTGTTGGGGCAGAGCTGAATCAGCCTGTTTATCTTGACATTCTCATGCCACCGTTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTTCTAGAGTGCTTCACATCTATTGCACACGCACTGGGTCCCGGATTCACTCAATTTGCTGAACCTGTGTTTAGGAGGTGCATAAATATAATTCAGACCCAGACATTGGCTAAGGCCAATCCTGCTGCAGCTGGGGCTCAGTATGACAAGGAGTTCATTGTATGCTCTCTTGATTTGCTTTCTGGACTAACAGAGGGTCTTGGCAGTGGAATAGAGAGTTTGGTTTCACAATGTTCTTTGAGGGACCTACTGTTGCAATGTTGTACTGATGATGCTCACGATGTTCGCCAAAGTGCATTTGCCTTACTTGGAGACCTTGCTCGAGTGTGTGTGGTTCATTTGCACCCTCGTTTGTCTGAGATTCTTGAACTTGCCGCCAAACAGCTGGAAATTTCTAAGGTACATCAGGCTATTTCCGTGGCAAATAATGCATGCTGGGCAATTGGAGAATTAGCAGTTAAGGTTCGTCAAGAAATTTCTCCGTTTGTTTTAAGTGTAATTTCATGCCTGGTACCAATTCTTCAGCATGCAGAGGGACTCAACAAGTCACTTATAGAAAACAGTGCAATAACACTGGGGAGGCTTGCATGGGTCTGTCCAGACCTTGTATCACCACATATGGAGCATTTCATGCAACCTTGGTGCAATGCTCTGTCAATGATACGAGATGATGTTGAGAAAGAAGACGCCTTTAGAGGTCTATGTGCTATGGTCAAAGCCAATCCTTCTGGAGCTCTAAGTTCGCTTGTTTATATGTGTAAAGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGGTCTTGCATGGGTATAAACAGATGTTGCGCAATGGAGCATGGGACCAGTGTATGTCTGCATTGGAGCCGCCAATAAAAGAAAAGCTTTCAAAATATCAAGTATAA 2688 0.4315 MAAAVTPSWQPQEQGFKEICTLLEQQISHSSSSADKSQIWNQIQQYSNLPDFNNYLIFIFSRAQGISVEVRQAAGLYLKNNLRNVYNLMQPEYQQYVKSELLPCLGAADKHIRSTTGTIISVVVQTGGVSQWPELLQALVSCLDSSDLNHMEGAMDALSKICEDVPQILDTDVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFILANDPTAEVRKLVCAAFVQLIEVRPSILEPHLRNVIEYMLQVNKDADEEVALESCEFWSAYCDAQMPPENLREFLPRLIPILLSNMAYADDDESLIEAEEEGSQPDRDQDLKPRFHVSRFHGSDDAEDDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVEAKLSTVGDDGWKEREAAVLALGAIGEGCINGLYPHLPEIVAFLIPLLDDKFPLIRSISCWTVSRFSKFIIQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMVAFGKYQRRNLRIVYDAVGTLAEAVGAELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGPGFTQFAEPVFRRCINIIQTQTLAKANPAAAGAQYDKEFIVCSLDLLSGLTEGLGSGIESLVSQCSLRDLLLQCCTDDAHDVRQSAFALLGDLARVCVVHLHPRLSEILELAAKQLEISKVHQAISVANNACWAIGELAVKVRQEISPFVLSVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPDLVSPHMEHFMQPWCNALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVYMCKAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4323 895 Pfam Importin-beta N-terminal domain 40 106 IPR001494 GO:0006886|GO:0031267
Mtr1g4323 895 SUPERFAMILY ARM repeat 9 885 IPR016024 -
Mtr1g4323 895 Pfam HEAT repeat 670 698 IPR000357 GO:0005515
Mtr1g4323 895 PANTHER TRANSPORTIN 1 ISOFORM 1 9 893 - -
Mtr1g4323 895 Gene3D - 6 895 IPR011989 -
Mtr1g4323 895 ProSiteProfiles Importin-beta N-terminal domain profile. 39 107 IPR001494 GO:0006886|GO:0031267
Mtr1g4323 895 SMART IBN_N_2 39 107 IPR001494 GO:0006886|GO:0031267
Mtr1g4323 895 PANTHER IMPORTIN BETA 9 893 IPR040122 GO:0006606
Mtr1g4323 895 Pfam HEAT-like repeat 410 463 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4323 K18752 - gmx:100792702 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4323 1 54911714 54926000 Mtr1g4323 1 54911714 54926000 ECH