Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4317 ATGGGGTGTGTTGCCTCAAAACTAGAGGAAGAAGAGGAAGTAGTAGCTATTTGTAGAGAGAGAAAACGTCAGCTGAAACTAGCTGTAGAGAAAAGATATGCACTTGCTGAAGCTCATTGTAAATATTTTCACTCTTTGAATGCTGTAGCTGCTGCTATTAAGCTTTTTGTTGCAAGACATTCTTCACCTTCTTCACCTTTCCTTATAACTTTCCCTCCTAAGGGTCTTGACCCTTCTCCTTCTCATTCATCTGCTGAAAATGTCATAAATAACCCTATGTTTCTCCAGCAAACACCATCAGAAACCAAGCATGAATCTGTTGCTTGCAACTCATGTATTGGTTCCACAACCTCAGAGTCTTCTGAGGAAGAGGGAGAGAGAGAAGTTGAAGGTTGTAGAGAAGTTCAAAATGAACAGCCAAGTGAGTATTTCTACATGCACATGCCTATGAATATGCCTATGCATCATATGTCTATGCCACCACCTTCAATGCCTTCACCGCAGAGAGATTTTGGTTGGGATTTCTTTTACCCTTTTGACAGTATGAGGCCAGAGGTTATGAATGGCTACCATAGGAATTCAGATGATGATTTGAGGGCAGTGAGGGAGGAAGAAGGGATTCCAGAGTTAGAGGAGGAAGTAGAAAGGGTAGAACTTGAGCATAAGGTGGTGGTGAGTGTCAAAGAGAAGAATAATAAAGAAGGCGGAGGGAAAGTTGTGAGTGGTGTTGAAACGGCGAAGCCTGTGGATGTGGCTAATGAAAATGAAAATGTTGGGGAGCAAAAGGGGCTTGCTGTTCTTGATACACCTGCAGAGGGGAGAGAGTTGCTTGAAGCTTTGAAAGATATCGAGGACCATTTCATTAGGGCTTATGAGTCTGGTAAGGGCGTGACCAAGATGCTTGAGGCTAATAGAATTCCCCTTCATTCTAGTTTGGAGGAAATCAAAGAAAGTTCGACCAAACTCATTAATGCAATAACATGGAAGTCCATGTCATCTAGGCAATCATCATGCAAGAGTCTGGTGGTTCAAAATATGAAGGATTCTTCAAGTTGGGTGGAATATAAGAATGATCTATTTGATGATTATGGAGGAATGGATTCGGGAAGTCATTTATTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAATTGTTTGAGGAGGTTAAGGCTGGAGATAGCACGCGGAAAAATTATGAGAAAAAATGTGCTCAGTTGAGAAATAAGAATGTTAGAGGAGATGATGAATTAAGCATGGACAAGACTAGAGCTGATATGAAAGATCTGTATGCTGGGATCTTGGTTGCAATTCGACGTGCAGAGTCGATCTCAAAGAGAATTCAGAAAATGAGAGACGAAGAATTACAGCCTCAAATTGTTGAACTATTGAAAGGCCTAACACAATCGTGGAAAATCATGTTGGAGTCTCATGAAACTCAGAAGATGATTCTTTCCGAAGTCAAATACTTCACATGTCCCCCTTACGATAAATTTTGCAATCAATCTCGTGGATTGGCAACTCTTCAGCTTGAAGCCGAGCTTCATCATTGGCGTGCGTGCTTTAGAGAGTATACCGCAGCTCAAAAAGCATACGTAGAAGCTCTGCATGGATGGTTAAGTAAGTTCGTAGTCCATGAAGTTGAATTTTACTCGAGAAGCAAAAATGTTGCCATGCCAATGCCATTTCAAGTCAATGGGCCACCATTACTTGTGATATGCAATGATTGGTTAACTTCCTTACGAAAGTTGCCTGATAAGACAGTAGCACTCGCTTTGAAAAGTGTTGTGAAAGATGTGAAAGCTCTTTGGATTCAACAAAATAAAGAGCAGCAACAGAAGAGGAAAGTAGATAACTTAACGAAAGATTTAGATAGAAGATATGATGGATCATATAAACTGAAGACGAAGATGCTTGAGTTGCAAGTAACAGATCATAGATCAGAAGAAGAGTCTGTTCGTGAAGAAGAATGCTTAATGGATAAAGGTGATTACTTGGAGACACTGAGGAGAAAACTTGAGGTAGAGAAGGAGAAGCATTACAGTTGCATGCAAGAAACTCAGAGGATGACATTGAATGGATTGCAATTTGGGTTTTCTCAAGTACTTGAATCTTTGACAGAGTTCTCCAAAGCATCACAGAAAATGTACAATGATCTCGTGACTTTTAGTGAGAAAGCTGGGAACATTTCGTATATAGAAGATGGTGGTTGCAATGTGGAAAACTGCAACAGCCAAAATGGACAATAG 2247 0.4041 MGCVASKLEEEEEVVAICRERKRQLKLAVEKRYALAEAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPKGLDPSPSHSSAENVINNPMFLQQTPSETKHESVACNSCIGSTTSESSEEEGEREVEGCREVQNEQPSEYFYMHMPMNMPMHHMSMPPPSMPSPQRDFGWDFFYPFDSMRPEVMNGYHRNSDDDLRAVREEEGIPELEEEVERVELEHKVVVSVKEKNNKEGGGKVVSGVETAKPVDVANENENVGEQKGLAVLDTPAEGRELLEALKDIEDHFIRAYESGKGVTKMLEANRIPLHSSLEEIKESSTKLINAITWKSMSSRQSSCKSLVVQNMKDSSSWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCAQLRNKNVRGDDELSMDKTRADMKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKIMLESHETQKMILSEVKYFTCPPYDKFCNQSRGLATLQLEAELHHWRACFREYTAAQKAYVEALHGWLSKFVVHEVEFYSRSKNVAMPMPFQVNGPPLLVICNDWLTSLRKLPDKTVALALKSVVKDVKALWIQQNKEQQQKRKVDNLTKDLDRRYDGSYKLKTKMLELQVTDHRSEEESVREEECLMDKGDYLETLRRKLEVEKEKHYSCMQETQRMTLNGLQFGFSQVLESLTEFSKASQKMYNDLVTFSEKAGNISYIEDGGCNVENCNSQNGQ* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4317 748 Pfam Protein of unknown function (DUF632) 276 600 IPR006867 -
Mtr1g4317 748 MobiDBLite consensus disorder prediction 115 134 - -
Mtr1g4317 748 Coils Coil 200 220 - -
Mtr1g4317 748 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Mtr1g4317 748 MobiDBLite consensus disorder prediction 120 134 - -
Mtr1g4317 748 Coils Coil 8 28 - -
Mtr1g4317 748 Coils Coil 396 416 - -
Mtr1g4317 748 PANTHER UNCHARACTERIZED 1 728 - -
Mtr1g4317 748 PANTHER OS09G0542500 PROTEIN 1 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4317 Mtr-Chr1 54859981 54864015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4317 1 623 Acyl Lipid Metabolism Gene Families AT2G27090 27.500 8.33e-58 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4317 - - gmx:100807897 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4317 1 54859981 54864015 Mtr1g4317 1 54859981 54864015 ECH