Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4313 ATGGCGTTTTGGCATAGAATTGGAAATTCTAAGCTCAAAGCTGCATGCTTCCAATTTCGAAGATGCTACACTCATCTTTCTCATGCTTCTCTATCAAATTCCACCCCTAAAACTTGCCCTACTGTGATGCCAAATCCTCATTCGCTTTTCCATGATAGGCCCACAATTTTTCTCAATAGCGTCAGGTTTTATGCTGTTCCTGTTCAGTTTCAGGTAAAGCCCAAGAATGAAGAGGATGACACTGATGGGCCACGGTTGAATGACCAAATCAAAGCTAGACAAGTCAGACTTGTGGTGGATGGCGAACATTCAATAGTGTCAAGGTTTGAAGCATTGGAACGTGCCAGGAAGCTTAAACTTGATTTAGTTGAGGTTGATAAAAATTCTACTCCACCTGTTTGTAAAATCATGGACTATCACAAGGAAATGTACAAGAAGAAAGAAAATTTCAAGGAGCGTGCTAAAAGCAAGTCTGAGATGACAATGAAAAAGGAATGCAAGGAAGTACGATTTTCTGAAAAAACCGAATCAAAAGACCTTAAGATGAAATCAGATATGGTTAGAAAGTTAATGGAGAAGGGTTATCGGGTTAAGGTCAAGGCAACAGGTAACGCAGATCAGGCCATGTTAGACGCAATATCTCGTCTTTCGGCTCTGATAGAAGATGTCTGTGTTGTGGAAAGTGGACCGCATCTGGCAAAAAAAGACGCTTATATTATAGTCAGACATCTTAAATATGGACCGGCTAAGAAAGGTGCGAAAAAATCGCAAGACGCCGTACGTATGGATTCAAAGGCCGAGGAGGGTGATGTGGAACCATTAACTACCAATTCTAGCAATTCAGTTGAAACACCGGATACATTGACTAATAGTATCAATGATGGGAATGATTCAGTATCTCCACCCGTGGTAGAAAATAGGTACAAAAAAGCTAATTATCGTGTTGAGAACAAGTTTCAATCAAATGCGCAAGCGCCTCCCGATGTGACCGAGAATAGGTACAAACAAGCCGAGCCAAGAAACAGATACCAACATGAGAACAGGTTTCAACCAAATGCGCAAGTGCCTCCTGTTGTGACTGAGAATAGGTACATACAAGCCGAGCCAAGAAACAGATACCAACAGACCACACCAAATACAAGTCCAGGGACAAGAGATGCAAATAGGTGGATCGAGAACAAGGTTCAATCAAATGCACAAGTGCCTCCTGTTGCGGTCGAGAATAGGTACATAAAAGCCGTGCCAAGAAATAGATACCAACAGACAGCGCCAAATACAAGTCCAGGTACAAGAGATGCAAATAGGTGGACACCCTCGAATCTGAATAACACAAGAAATGTCCATGTAAATAATTTTAATCCCAATACTGAAAGTACCAATCAAGCTATTGATAAACCAAATGGCCCTCAGACAGTGCAAAGGAACAGATAA 1431 0.4151 MAFWHRIGNSKLKAACFQFRRCYTHLSHASLSNSTPKTCPTVMPNPHSLFHDRPTIFLNSVRFYAVPVQFQVKPKNEEDDTDGPRLNDQIKARQVRLVVDGEHSIVSRFEALERARKLKLDLVEVDKNSTPPVCKIMDYHKEMYKKKENFKERAKSKSEMTMKKECKEVRFSEKTESKDLKMKSDMVRKLMEKGYRVKVKATGNADQAMLDAISRLSALIEDVCVVESGPHLAKKDAYIIVRHLKYGPAKKGAKKSQDAVRMDSKAEEGDVEPLTTNSSNSVETPDTLTNSINDGNDSVSPPVVENRYKKANYRVENKFQSNAQAPPDVTENRYKQAEPRNRYQHENRFQPNAQVPPVVTENRYIQAEPRNRYQQTTPNTSPGTRDANRWIENKVQSNAQVPPVAVENRYIKAVPRNRYQQTAPNTSPGTRDANRWTPSNLNNTRNVHVNNFNPNTESTNQAIDKPNGPQTVQRNR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4313 476 MobiDBLite consensus disorder prediction 415 476 - -
Mtr1g4313 476 Gene3D - 160 249 IPR036788 GO:0006413
Mtr1g4313 476 Gene3D - 77 153 IPR036787 GO:0003743|GO:0006413
Mtr1g4313 476 MobiDBLite consensus disorder prediction 418 476 - -
Mtr1g4313 476 Pfam Translation initiation factor IF-3, N-terminal domain 86 152 IPR019814 GO:0003743|GO:0006413
Mtr1g4313 476 MobiDBLite consensus disorder prediction 250 303 - -
Mtr1g4313 476 MobiDBLite consensus disorder prediction 271 300 - -
Mtr1g4313 476 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 165 245 IPR036788 GO:0006413
Mtr1g4313 476 PANTHER TRANSLATION INITIATION FACTOR IF-3 1 473 IPR001288 GO:0003743|GO:0006413
Mtr1g4313 476 MobiDBLite consensus disorder prediction 251 270 - -
Mtr1g4313 476 PANTHER TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL 1 473 - -
Mtr1g4313 476 TIGRFAM infC: translation initiation factor IF-3 86 237 IPR001288 GO:0003743|GO:0006413
Mtr1g4313 476 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 83 155 IPR036787 GO:0003743|GO:0006413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4313 K02520 - gmx:100808433 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4313 1 54806281 54814236 Mtr1g4313 1 54806281 54814236 ECH