Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4311 ATGGAAACAACAAAAATATTTGAAGAAGAAGATGTTGTGATTGTGGGAGCTGGAATTGCTGGCCTTGCTACTGCCTTAGGACTTCACAGGTTAGGTGTAAGAAGTTTGGTATTGGAATCTTCAGATAGTTTGAGAGTAACTGGATTTGCTTTAGGAATATGGGAAAATGCTTGGAAAGCCTTGGATGCTGTTGGTGTTGGAGATATCCTCCGCCACAAACATATACATCTTTATGGGAATGTGACTACTTCTTTGATTACAGGACAGCAATTAGCAACTATGTCTTTCAGGGACAAAGGAAAGCTTGAACTACGAAGTGTTAGAAGAAAGTTATTGTTGGAAGCCCTTGGCAATGAACTTCCAAATAGCACCATTAGGTACATGTCAAAAGTCGTTGCTATAGAGGAATCTGGATTCTTTAAAATACTACATCTTGTTGATGGAACAACCATCAAAACAAAGGTATTGATAGGATGTGATGGAATCAACTCTGTGGTTGCAAAGTGGTTAGGCTTCAAGGAGGCCAGTTATACAGGGAGATATGGAATCAGGGGTTTCGCAGAGTTGGAAAACAATCACAGTTTTGAGCCTATGCTTATGCAGTTCTATGGCAAAGGTTTTAGAGCTGGAGTTGTTCCTTGTCATGAGAAAGGTGTTTACTGGTTTTTCACTTGGACTCCTGCCACCCAAGATAAGGAGCTAATGGAAAACCCTGCTAAACTGAAGCAATATGTGTTAAACAAGCTAGAGAATATGCCAAGTAATGTTATATCTATCATAGAAAAAACAGATTTAGATGCTTTCCATTCAGCTCCATTGAGATATAGACATCCTTGGGAGCTTATAATGGGAAATATTAGTAAAGGAAATGTTTGTGTTGCTGGAGATGCTTTACACCCTATGACACCTGATCTTGGTCAAGGGGGGTGTTCTGCTTTAGAGGATGGGGTGGTTTTAGCAAGGTGTCTAGCTGAGGCCTTGTCCAAAAAACAAAAGGAAGAGGAGAAATACAAAAGAATTGAACAAGGGTTGAAGAAATATGCAAAAGAAAGAAGATGGAGATGCATTGATCTTATTACTACAGCTTATATTGCAGGTGTTATTCAGCAGGCTGATTCAAAATTTGTTACATTTTTTAGGGACAAAATTTTGGCTCCATTACTAGCTGGTCAGTTATTCAAGAAATCTGGTTTTGATTGTGGTAAACTCAATTAG 1215 0.3885 METTKIFEEEDVVIVGAGIAGLATALGLHRLGVRSLVLESSDSLRVTGFALGIWENAWKALDAVGVGDILRHKHIHLYGNVTTSLITGQQLATMSFRDKGKLELRSVRRKLLLEALGNELPNSTIRYMSKVVAIEESGFFKILHLVDGTTIKTKVLIGCDGINSVVAKWLGFKEASYTGRYGIRGFAELENNHSFEPMLMQFYGKGFRAGVVPCHEKGVYWFFTWTPATQDKELMENPAKLKQYVLNKLENMPSNVISIIEKTDLDAFHSAPLRYRHPWELIMGNISKGNVCVAGDALHPMTPDLGQGGCSALEDGVVLARCLAEALSKKQKEEEKYKRIEQGLKKYAKERRWRCIDLITTAYIAGVIQQADSKFVTFFRDKILAPLLAGQLFKKSGFDCGKLN* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4311 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 - -
Mtr1g4311 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 - -
Mtr1g4311 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 - -
Mtr1g4311 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 - -
Mtr1g4311 404 Gene3D - 11 384 IPR036188 -
Mtr1g4311 404 Pfam FAD binding domain 11 334 IPR002938 GO:0071949
Mtr1g4311 404 Coils Coil 323 350 - -
Mtr1g4311 404 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 8 404 IPR044560 -
Mtr1g4311 404 PANTHER MONOOXYGENASE 2-RELATED 8 404 - -
Mtr1g4311 404 SUPERFAMILY FAD/NAD(P)-binding domain 11 388 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4311 Mtr-Chr1 54778672 54781013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4311 10 404 Miscellaneous Gene Families AT5G05320 54.115 2.42e-156 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4311 - - mtr:MTR_1g112780 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4311 1 54778672 54781013 Mtr1g4311 1 54778672 54781013 ECH