Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4310 ATGGAAACTGTGATTGTAAAAGATATTGTGATCGTAGGAGCTGGAATTGCTGGCCTCACAACATCCTTGGGACTTCACAGATTAGGTATTGAAAGTTTGGTATTAGAATCTTCTGATAGCTTGAGAGTTGGTGGATTTGCTTTAACGGTATGGGAAAATGCTTGGAAGGCGTTGGATGTTGTTGGTGTTGGAACCATCCTCCGCCACCAACATCTACAACTTCATGGGAATGTGACTACTTCTTTGGTTATGGGGCAACAGACATCAACTACGTCTTTCATGGACAACAAAGGAAAGTATGGAGCCCGTGAAGTTCGGTGTATTGGAAGAAATTTATTGTTGGAAGCCCTTGCAAATGAACTTCCCAATGGCACCATTAGGTACATGTCAAAGGTTGTTGCTATTGAGGAATCTGGTTTTTCCAAAATACTACATCTTGTTGATGGAACAACCATCAAAACCAAGGTATTGATTGGGTGTGATGGAGTAAACTCTGTGGTGGCAAAATGGTTAGGGTTCAAGGAAGCCTCATACACAGGGAGATATGCAACCAGAGGTTATGCAGAGTTGAAGACCACTCACAACCTTGAACCAATGTTCATGCAGTACTTTGGCAAAGGTTTTAGGGCTGGGGCTATCCCATGTGATGAGAAAAGTGTTTATTGGTTTTTCACATGGACTCCTATTAACCAAGATAAAGAGCTAGCACAAGACCCTGCTAAGCTAAAACAATATGTGTTAAACAAGTTAGAGAAGATGCCAAGTGATGTTAAACATTTCATAGAAAACACAGAATTAGATGCATTTCAATCAGCTCCATTGAGACATAGACATCCTTGGGAGCTTATGATGGGAAATATTAGTAAAGGCAATGTTTGTGTTGCTGGAGATGCTTTACACCCTATGACACCTGATCTTGGTCAAGGGGGGTGTTCTGCTTTAGAGGATGGAGTGGTTTTAGCAAGGTGTTTAGCCGAGGCCTTTTCGAAGAAACCAAAGGAAGAAGAAGAAGAAGAAGAAGAATACAAAAGGATTGAGGAAGGTTTCAAGAAATATGCAAAGGAGAGAAGATGGAGATGCATTGATCTCATTATTGCAAATTATTTTGTGGGTTCTATTCAGGAAAGTGGTTCAAAATTGGTTAACTTCTTCAGGGATAAAATTTTGGCTACATACTTAGCTAGTCAGTTATTGAAGAAATCTAATTTTGATTGTGGTAAACTAAAAAATAGCCCTTAA 1239 0.3979 METVIVKDIVIVGAGIAGLTTSLGLHRLGIESLVLESSDSLRVGGFALTVWENAWKALDVVGVGTILRHQHLQLHGNVTTSLVMGQQTSTTSFMDNKGKYGAREVRCIGRNLLLEALANELPNGTIRYMSKVVAIEESGFSKILHLVDGTTIKTKVLIGCDGVNSVVAKWLGFKEASYTGRYATRGYAELKTTHNLEPMFMQYFGKGFRAGAIPCDEKSVYWFFTWTPINQDKELAQDPAKLKQYVLNKLEKMPSDVKHFIENTELDAFQSAPLRHRHPWELMMGNISKGNVCVAGDALHPMTPDLGQGGCSALEDGVVLARCLAEAFSKKPKEEEEEEEEYKRIEEGFKKYAKERRWRCIDLIIANYFVGSIQESGSKLVNFFRDKILATYLASQLLKKSNFDCGKLKNSP* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4310 412 SUPERFAMILY FAD/NAD(P)-binding domain 8 395 IPR036188 -
Mtr1g4310 412 Coils Coil 335 355 - -
Mtr1g4310 412 PANTHER MONOOXYGENASE 2-RELATED 5 411 - -
Mtr1g4310 412 Pfam FAD binding domain 8 330 IPR002938 GO:0071949
Mtr1g4310 412 Gene3D - 8 379 IPR036188 -
Mtr1g4310 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Mtr1g4310 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 - -
Mtr1g4310 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 - -
Mtr1g4310 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 - -
Mtr1g4310 412 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 411 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4310 Mtr-Chr1 54773222 54778042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4310 1 410 Miscellaneous Gene Families AT5G05320 52.427 1.69e-152 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4310 - - mtr:MTR_1g112780 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4310 1 54773222 54778042 Mtr1g4310 1 54773222 54778042 ECH