Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4292 ATGGACGGCGCAGGCGAAGAAGAAATGAAGCCATGGGAGCAGCATTCGAGCGTAATCAGACTTCCTCGGTTTGACTACAATGCTCCGTCTTCTCTTCTCACTCATTCTCATTCCGCCTTTCTTATCACTTGTACAATCAAGCGTGAGAAAAGTGCTACTAAAGAAGCTATTAACCTCCTTCATAACTTCCTACTTAATGATGATGTCTCTTCCAAGAGAAGGAGGTTAGATAACAAAGATGGAGGAGGAGGAGAAGTGACAACTGATCTTTCCTTGGTTAAACTCATAAGGAATGGTTTGGTACTTTTTATCTTTCCTCAAGACACCTTCCATGACACTGTTCCTATTGTCTCTAATATCATTCAGGCTTTGGAATCTCGGAAGATTACTTTGCCTCTTTGGTGCCACCGCATTTTGCCGATCCAAGCTACCTGTAGTTTGAACGAAAAAGAACTGCAAGAAGTAGTATCAATGCTTGTTAAAAAATTTGTGGATGCTAACCAGGATCAACTGGGACGACCTTTAAAGTTTGCTGTCGGGTTTAACCGAAGAGGAATAGAAGAGACAAAATCTGCAAAAGAAAATTTAAATGGTTCTAATAGTTTGCTGGACCGCAATAAATGCTTTCAAATAGTGGGTACCGCTGTCAATAGTGTTGTGAAAGATTCAGTAGTGGATCTAAGGTCTCCAGAGCTATCTGTTTTTGTTGAGGTTCTGCCCCTTTCTGGAGTACCTAATGGGTCCATAGTGGTTGCTGTTTCTGTTCTTCCCAGCAACCTTGTTAGCACTAAGCCTCGACTCTCTGTTAAGGCCCTTAATTCTAATACTAAGGAAGGGTCCGTGGCTCAATGA 852 0.4202 MDGAGEEEMKPWEQHSSVIRLPRFDYNAPSSLLTHSHSAFLITCTIKREKSATKEAINLLHNFLLNDDVSSKRRRLDNKDGGGGEVTTDLSLVKLIRNGLVLFIFPQDTFHDTVPIVSNIIQALESRKITLPLWCHRILPIQATCSLNEKELQEVVSMLVKKFVDANQDQLGRPLKFAVGFNRRGIEETKSAKENLNGSNSLLDRNKCFQIVGTAVNSVVKDSVVDLRSPELSVFVEVLPLSGVPNGSIVVAVSVLPSNLVSTKPRLSVKALNSNTKEGSVAQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4292 283 PANTHER OS02G0672400 PROTEIN 5 280 - -
Mtr1g4292 283 CDD THUMP_THUMPD1_like 40 257 IPR040183 GO:0003723|GO:0006400
Mtr1g4292 283 SUPERFAMILY THUMP domain-like 148 239 - -
Mtr1g4292 283 Pfam THUMP domain 135 239 IPR004114 GO:0003723
Mtr1g4292 283 PANTHER THUMP DOMAIN CONTAINING PROTEIN 1-RELATED 5 280 IPR040183 GO:0003723|GO:0006400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4292 - - mtr:MTR_1g112360 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4292 1 54575714 54579604 Mtr1g4292 1 54575714 54579604 ECH