Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4218 ATGGTTATGGATCATTCTGATTTAGCGATTGCGTATCCTCTTTCTGCCATTGCCGAAGCCTTTGAGGATCTTTCCACAAAGGTTCAAGGAATCAAGAATGGTTCCTCCACTCAACATATTCGCTTAGACTCTTTCTGTGAAATCGCTTCCCTTGTTTCTGTTCTTTTTCGTTGTCTTGGTCTTGCTTTCAAATTCGCTGAAATGGAATACGTTGCCAAGCTACATGGACTAGTGGAAGCATCAAAGACGTATCAGACTCTACAAGATGTAATTGACCATGATGTAGCCCGTGACACAGTGAAAACATCCGGAAGCTATTCACGTAATCTACGTAGAGTTCGCCAGGGCCTTGATCTCGTTAGAGCTATATTCGAACAACTTTTGTCAACTAGTGATATTTATCTAAAAGAAGTGGCTTCAACAGCTTATGGAGAGGTTTGTGCACCGTATCATTCATGGGGAGTCAGAACGGCTGTGTATGCTGGAATGTATACACTTCCAACGAGAGACCAACTTTTTGTAAAGCTCAATGAAACAGAGCAATCAGCGGAGAAGAAGATGAGAAGGTACATTACTGCCTCACGTCCAGTTATAGAATACATTGATAAAATGTACCTTACTCGAAATATTGCATTGGACTGGTGA 645 0.4155 MVMDHSDLAIAYPLSAIAEAFEDLSTKVQGIKNGSSTQHIRLDSFCEIASLVSVLFRCLGLAFKFAEMEYVAKLHGLVEASKTYQTLQDVIDHDVARDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTSDIYLKEVASTAYGEVCAPYHSWGVRTAVYAGMYTLPTRDQLFVKLNETEQSAEKKMRRYITASRPVIEYIDKMYLTRNIALDW* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4218 214 Pfam Glycolipid transfer protein (GLTP) 40 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Mtr1g4218 214 Gene3D Glycolipid transfer protein 7 214 IPR036497 -
Mtr1g4218 214 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 11 214 - -
Mtr1g4218 214 SUPERFAMILY Glycolipid transfer protein, GLTP 36 213 IPR036497 -
Mtr1g4218 214 PANTHER ACD11 HOMOLOG PROTEIN 11 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4218 Mtr-Chr1 53866981 53869853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4218 13 214 Acyl Lipid Metabolism Gene Families AT4G39670 66.010 1.94e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4218 - - aprc:113872428 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4218 1 53866981 53869853 Mtr1g4218 1 53866981 53869853 ECH