Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4090 ATGGATCCAAACGAGAATCCACCTAAAACCAAAAGACAGATCTTCATCCTCTCAGGTCAAAGCAACATGTCAGGTCGTGGCGGTGTCATCAAGCATCCTAATCACACTCCAAACAAGCGCTGGAACGGTGTTGTTCCGCCGGAGTGCAGTCCCGATCCTTCCATCTTACGCTTCAGCGCCAACCTCAAATGGGAACCAGCACAGGAACCTCTCCACACCGACATCGACACCAAGAAAGTCTGCGGCCTTGATTCTGGAATGTCATTCGCCAACTCATTACGGCGCCGCGTGGCCGGAGAATTGGGACTAGTCCCATGTGCCGTTGGTGGCACCGCGATAAAGGAGTGGGCGCGTGGGGAAGAACTGTACGAAAACATGGTGAAGAGAACAAAAGAAAGCGTAAAGGGAGATGAAAATACAGAGATCAAAGCGTTGCTTTGGTTTCAAGGAGAGAGTGACACGTCGAGTGAACATGACGCAGAGGTTTACAGAGTCAACATGGAGAATCTCATCCATAATGTTCGTCAAGATCTCAATTTACCTTCTCTTCCAATAATCCAGGTTGCTCTAGCATCAGGGTTTGAATACATTGAAAAAGTGAGAGAAGCGCAGAAAGGGATTAATATTCCGAATGTGATTTGCATTGATGCAAAGGGATTGCCTCTGAATGAAGATAATCTTCACTTGAACACAGAATCTCAGGTTAAATTGGGTCACATGCTGGCTGAGGCGTATCTTACTCATTTTGTTTAA 753 0.4675 MDPNENPPKTKRQIFILSGQSNMSGRGGVIKHPNHTPNKRWNGVVPPECSPDPSILRFSANLKWEPAQEPLHTDIDTKKVCGLDSGMSFANSLRRRVAGELGLVPCAVGGTAIKEWARGEELYENMVKRTKESVKGDENTEIKALLWFQGESDTSSEHDAEVYRVNMENLIHNVRQDLNLPSLPIIQVALASGFEYIEKVREAQKGINIPNVICIDAKGLPLNEDNLHLNTESQVKLGHMLAEAYLTHFV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4090 250 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 12 246 IPR005181 -
Mtr1g4090 250 SUPERFAMILY SGNH hydrolase 13 248 - -
Mtr1g4090 250 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 8 249 - -
Mtr1g4090 250 PANTHER BNACNNG62850D PROTEIN 8 249 - -
Mtr1g4090 250 Gene3D SGNH hydrolase 12 250 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4090 Mtr-Chr1 52462979 52465038 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4090 - - mtr:MTR_1g107475 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4090 1 52462979 52465038 Mtr1g4090 1 52462979 52465038 ECH