Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4078 ATGGCATCCGAAGCTTCAATTCACATCCTCCTTGTTTCTTTTCCAGCACAAGGACACATAAACCCTCTTCTTAGACTAGGTAAATGTCTTGCTGCAAAGGGTGCTTCTGTCATCTTCATCACAACAGAAAAAGGTGGCAAAAATATGCGAATCACCAACAAATTAGCTACTCCAATTGGTGATGGTTCTCTAATGTTCCAGTTCTTTGATGACGGTTTACCCGATTATGCTCACCCTCTTGACCACCACAAAAAACTTGAGCTTGTTGGGAGACAATTTATTTCTCAAATGATAAAGAATCATGCTGATTCGAACAAACCAATTTCATGTATTATAAACAACCCTTTTTTTCCATGGGTTAGTGATATAGCTTTTGAACACAATATTCCTTCTGCTTTGTTATGGACTAATTCTAGTGCTGTTTTCACCATTTGCTATGATTATGTCCACAAATTGTTACCTTTCCCTTCAAATGAAGAACCTTATATTGATGTTCAACTCAACTCTTCTATAGTTCTTAAATACAATGAAATCCCAGATTTTATACATCCTTTTTGTAGATATCCAATTCTAGGGACACTCACCACGGCACAGATAAAGGACATGTCTAAAGTGTTTTGTGTATTAGTGGATACCTTTGAAGAATTAGAGCATGATTTCATCGATTATATTTCGGAAAAATCAATCGCCATAAGACCCGTTGGTCCTTTGTTTAAAAATCCAAAGGCAAACGGAGCAAGCAACAATATACTTGGTGATTTCACTAAGAGCAATGATGATTGTAATATTATAGAGTGGCTAAACACAAAGCCAAAAGGTTCTGTGGTTTATATTTCTTTTGGTACTGTTGTGTATCTTCCTCAAGAACTAGTGTATGAAATAGCATATGGGTTATTGGATTCTCAAGTCACATTTTTGTGGGCAAAGAAACAACATGATGATTTGCCGTATGGATTCTTGGAGGAAACAAGTGGGAGAGGAAAAGTAGTGAATTGGAGTCCACAAGAACAAGTATTGGCTCATCCATCAGTGGCATGTTTCATAACACATTGTGGTTGGAACTCATCAATGGAAGCACTTACTTTAGGAGTTCCAATGTTGACATTTCCAACATTTGGTGACCAACTTACAAACGCAAAGTTCTTGGTTGATGTTTATGGGGTTGGGATTAGATTGGCTCGTGGTGAAAGGAAACTGGTAAGAAGAGATGATTTAAAGAAATGCTTATTGGAAGTTACAACAGGGGAAAAAGCAGAGACGTTGAAGAAAAATGCAACCAAGTTGAAAAAGGCGGCGGAGGAAGCAGTGGCGGTTGGTGGTTCCTCGGACCGACATCTTGATGCATTTATGGAAGACATTAAGAAACACAAACGTTGTTAA 1380 0.379 MASEASIHILLVSFPAQGHINPLLRLGKCLAAKGASVIFITTEKGGKNMRITNKLATPIGDGSLMFQFFDDGLPDYAHPLDHHKKLELVGRQFISQMIKNHADSNKPISCIINNPFFPWVSDIAFEHNIPSALLWTNSSAVFTICYDYVHKLLPFPSNEEPYIDVQLNSSIVLKYNEIPDFIHPFCRYPILGTLTTAQIKDMSKVFCVLVDTFEELEHDFIDYISEKSIAIRPVGPLFKNPKANGASNNILGDFTKSNDDCNIIEWLNTKPKGSVVYISFGTVVYLPQELVYEIAYGLLDSQVTFLWAKKQHDDLPYGFLEETSGRGKVVNWSPQEQVLAHPSVACFITHCGWNSSMEALTLGVPMLTFPTFGDQLTNAKFLVDVYGVGIRLARGERKLVRRDDLKKCLLEVTTGEKAETLKKNATKLKKAAEEAVAVGGSSDRHLDAFMEDIKKHKRC* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4078 459 Gene3D Glycogen Phosphorylase B; 12 446 - -
Mtr1g4078 459 CDD GT1_Gtf-like 8 435 IPR002213 GO:0008194
Mtr1g4078 459 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 456 - -
Mtr1g4078 459 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 456 - -
Mtr1g4078 459 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Mtr1g4078 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 428 IPR002213 GO:0008194
Mtr1g4078 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 454 - -
Mtr1g4078 459 Coils Coil 418 438 - -
Mtr1g4078 459 Gene3D Glycogen Phosphorylase B; 249 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4078 Mtr-Chr1 52350748 52352443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4078 8 453 Glycosyltransferase AT3G21560 49.036 1.24e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4078 - K23279 mtr:MTR_1g107365 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4078 1 52350748 52352443 Mtr1g4078 1 52350748 52352443 ECH