Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4076 ATGGCGTCTAATGAAGCTCCCATTCAGATTCTCCTTGTATCTTATCCTTCATACGGACATATAAACTCTCTTCTTAAACTAGGGAAGTGTCTTGCTGCAAAGGGTTCTTCTGTCATCTTCACCACAACGCAGAAAGCTGGCAAAGACATGGAAACTGCTAACAACATAACTAACAAAACAACCACTCCAATCGGTAAGGGTTTCCTCACTTTTGATTTATTTGACGATGGTTTGAAAGACGATGATCCCATGAGAACAAGTCTTGGTGACTACACATCACAGCTTGAGCATGTCGGGAAACTATATGTTTCCCAATTGATCAAAAATCATGCTGAGTCAAAAACACCAATTTCTTGCATCATAAACAACATTTTCATTTCATGGGTTTGTGATGTAGCCACAGAACACAAAATTCCTTTTGCTATTTTGTTTAATGAATCTAGTGCTGTTTTCACTTGTTACTATAACTATTTCCACAAACTGGTGCCTTTCCCTTCAAAAACAGAACCTTGTATTGATGTTCAATTGCCTTCTGTAGTCCTTAAACACAGTGAAATTCCTGTTCTTCTGCATCCTTCTAATACATATCCCTTTCTAGGCCCACTCATTTTAGGACAAATTAAGAATTTGTCTAAAGCATTGTGTGTATTTGTGGATACCTATGAAGAACTAGAGCCTGATTTTATCGATTATATTTCGGAAAAGTCAATCATCATAAGACCAATTGGTCCGGTGTTCAACAACCCAAACATAATAGGTGCAAGTAATATTCGTCGTGATTTTGTTAAGACTGATGATTCTACTATTATAGAGTGGCTAAACTCAAAGCCAAAAGGTTCTGTGGTTTATGTTTCCTTTGGGACTATTGTGCAACTTCCTCCAGAACAAGTGAATGAAATTGCATATGGGTTATTGAATTCTCAAGTCACATTTTTATGGGCAAAGAAAAAGCATGATGATTTGCCTCATGGATTTTTGGAGGAAACAAGTGGGAGAGGAAAAGTAGTGAAATGGAGTCCACAAGAACAAGTACTTGCTCATCCTTCAGTGGCATGTTTCATAACCCATTGTGGTTGGAATTCAACGATTGAATCACTTGCTTCAGGAGTTCCAGTGTTAACATTTCCAGTATTTGGTGACCAACCTACAAATGCAAAGTTCTTGGTAGATGTTTTTGGTGTAGGGATTAGATTGGGTTATAGTGGAGCTGAAAACAGATTGATAACAAGAGATGAGGTGAAGAAGTGCTTGTTGGAAGCTACAACAGGGGAAAAAGCAGAGGAGTTGAAGAAAAATGCAATCAAGTGGAAGAAGGCAGCGGAGGATGCAGTTGCCGTAGGTGGATCCTCCGACCGATATCTTGATGCATTTATCGAAGAAGTTGCGAAACAAGGCGCTGTTAATTTTCAGAAGATATGA 1419 0.3862 MASNEAPIQILLVSYPSYGHINSLLKLGKCLAAKGSSVIFTTTQKAGKDMETANNITNKTTTPIGKGFLTFDLFDDGLKDDDPMRTSLGDYTSQLEHVGKLYVSQLIKNHAESKTPISCIINNIFISWVCDVATEHKIPFAILFNESSAVFTCYYNYFHKLVPFPSKTEPCIDVQLPSVVLKHSEIPVLLHPSNTYPFLGPLILGQIKNLSKALCVFVDTYEELEPDFIDYISEKSIIIRPIGPVFNNPNIIGASNIRRDFVKTDDSTIIEWLNSKPKGSVVYVSFGTIVQLPPEQVNEIAYGLLNSQVTFLWAKKKHDDLPHGFLEETSGRGKVVKWSPQEQVLAHPSVACFITHCGWNSTIESLASGVPVLTFPVFGDQPTNAKFLVDVFGVGIRLGYSGAENRLITRDEVKKCLLEATTGEKAEELKKNAIKWKKAAEDAVAVGGSSDRYLDAFIEEVAKQGAVNFQKI* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4076 472 Gene3D Glycogen Phosphorylase B; 13 453 - -
Mtr1g4076 472 CDD GT1_Gtf-like 10 446 IPR002213 GO:0008194
Mtr1g4076 472 Gene3D Glycogen Phosphorylase B; 256 442 - -
Mtr1g4076 472 ProSitePatterns UDP-glycosyltransferases signature. 338 381 IPR035595 -
Mtr1g4076 472 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 465 - -
Mtr1g4076 472 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 465 - -
Mtr1g4076 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 263 392 IPR002213 GO:0008194
Mtr1g4076 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4076 Mtr-Chr1 52340229 52341899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4076 7 464 Glycosyltransferase AT3G21560 48.394 9.99e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4076 - K23279 mtr:MTR_1g107365 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4076 1 52340229 52341899 Mtr1g4076 1 52340229 52341899 ECH