Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4073 ATGGGGAGTGTTTGGTTGATGACAATTGCCATACTCTTATCCTTCGGAATCATCGCTCACTCTTTCGACGGCGGCAGCGCACCCCCCAAACAACAACCAACTCTCTGTGATGAACTCATTCTTCCAGCCGGTTACCCTTGCTCCGAATTTGTGATTGAAACAAAGGATGGTTTCTTGTTAGGTCTTCAGCGCGTGTCTTCTTCTTCTTCTTCTGCGCGTATTCGTTATTCTGCTCAACAACAACAACGAGGTCCTCCAGTTCTGCTTCTCCATGGCCTCTTCATGGCAGGTGATGCATGGTTTCTAAATACACCAGAACAGTCATTGGGCTTCATCCTTGCCGATCAAGGTTTTGATGTTTGGGTAGGAAATGTGCGTGGAACACGTTGGAGCCATGGGCATAAATCTTTATCAGAGAAGAATAAGCATTTTTGGGATTGGAGCTGGCAAGAATTAGCCCTGTATGATCTTGCGGAAATGATCAATTATATTAATTCAGTGACAAACTCAAAGTTATTTGTAGTTGGGCATTCACAGGGGACAATTATATCTTTTGCTGCCTTCACTCAACCGGATATAGTAAAAAAGGTTGAAGCTGCAGCTCTTCTGTCTCCAATTTCATACTTGGATCATATTAGTGCACCTTTGGTACTAAGAATGGAAAAGATGCACATTGATCAGATGATTTCTACAATGGGTGTTCATCAGCTGAATTTCAAAAGCGATTGGGAAACCAATCTCTTGATTTCCTTATGTGATACTCGTCTAAGTTGCAGTGACATGCTGTCATCCATTACAGGAAAGAATTGTTGCTTCAACGAGTCACGCGTGGCTTATTATCTTGAACAAGAACCTCACCCATCATCCTCCAAAAACTTGAACCACCTTTTCCAGATGATCCGCAAAGGCACCTTCTCCAAGTACGATTATGGAAAGCTTAAAAATCTGATAGAGTATGGCAATTTCAAACCACCAAAATTTGACCTTAGCCGCATACCCAGATCATTGCCTTTGTTGATGGCTTATGGGGGAAACGATGCTTTAGCAGATGTAACTGATTTCCAGCACACACTCAAGGAACTGCCATCCACACCTGAGGTGGTTTATCTTGAAAACTATGGTCACATTGACTTCATTTTAAGCTTGCAAGCAAAACAAGATCTTTATGACCCTATCATCAGTTTCTTCAAGTCAATGGGGAAATTTAGTAGTATTTAA 1218 0.4195 MGSVWLMTIAILLSFGIIAHSFDGGSAPPKQQPTLCDELILPAGYPCSEFVIETKDGFLLGLQRVSSSSSSARIRYSAQQQQRGPPVLLLHGLFMAGDAWFLNTPEQSLGFILADQGFDVWVGNVRGTRWSHGHKSLSEKNKHFWDWSWQELALYDLAEMINYINSVTNSKLFVVGHSQGTIISFAAFTQPDIVKKVEAAALLSPISYLDHISAPLVLRMEKMHIDQMISTMGVHQLNFKSDWETNLLISLCDTRLSCSDMLSSITGKNCCFNESRVAYYLEQEPHPSSSKNLNHLFQMIRKGTFSKYDYGKLKNLIEYGNFKPPKFDLSRIPRSLPLLMAYGGNDALADVTDFQHTLKELPSTPEVVYLENYGHIDFILSLQAKQDLYDPIISFFKSMGKFSSI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4073 405 Pfam Partial alpha/beta-hydrolase lipase region 38 104 IPR006693 GO:0006629
Mtr1g4073 405 PANTHER LYSOSOMAL ACID LIPASE-RELATED 27 399 - -
Mtr1g4073 405 Pfam Serine aminopeptidase, S33 109 238 IPR022742 -
Mtr1g4073 405 SUPERFAMILY alpha/beta-Hydrolases 38 397 IPR029058 -
Mtr1g4073 405 PIRSF Steryl_ester_lip 1 401 IPR025483 GO:0016788
Mtr1g4073 405 Gene3D alpha/beta hydrolase 27 398 IPR029058 -
Mtr1g4073 405 PANTHER TRIACYLGLYCEROL LIPASE 1 27 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4073 Mtr-Chr1 52315036 52320860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4073 5 404 Acyl Lipid Metabolism Gene Families AT2G15230 60.250 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4073 K01052 - gmx:100803830 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4073 1 52315036 52320860 Mtr1g4073 1 52315036 52320860 ECH