Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4062 ATGGAAGATGGAGATTGGGTTCTGGTACGCAGCCCCTCACAGAAAGACTTATGGAACCCAAGTTCACCAAATGCTGCTGATAATGAACCTTCAAGACCCTTGAAACTTACTTTTTCTGCGCCTGCAAAGTATTGGACTGATGCTATCCCCATTGGAAATGGTCGTCTTGGTGCCATGGTTTGGGGTGGTGTTCAAACTGAACTTCTCCAGCTCAATGACGACACGCTATGGACTGGGATACCTGGCAACTACACCGACAAAAATGCTCCTGAAGTGCTGGCTGAAGTCCGAAAACTTGTTGATGACAAAAAATATCCTGAAGCTACAACAGCTGCTGTCAAATTGTCAGGAGCTCCTTCTGAAGTATACCAACTTCTTGGCGATATTAAATTAGAGTTCGACGATTCTCATATTAAATATTCGGAAGAATCTTATCACAAGGAGCTCGATTTGGATAGTGCTACAGCAAAAATAAAGTACAATGTAGGTGATATAGAATTTACCAGAGAGCATTTTGCTTCTAAACCGGACCAAGTGCTAGCGACAAAGTTTTCCACAAGCAAGTCGGGTTCATTATCATTTACAGTATCTTTGGATAGCGAGTTACATCACAATTCGCGGGTAAGCGGCCAAAATCAGATAATAATGGAAGGAAGTTGTCCTGGCAAAAGGATCGCGCCACAAATGAATTCAAGTGGTGAACAAAAAGGAATTCAGTTTTGTGCAGTTCTTGATATGCAGATTAGTAATGACAAAGGTGTTATACATGTTTTAGACGACAAGAAGTTTAGAGTTGAAGGTTCAGATTGGGCTATTTTGCTTCTGACAGCTTCCTCGTCCTTTGATGGTCCATTTACTAATCCTGAAGACTCAAAGAAGGATCCTACTACTGAGTCCTTGAGTAAAATGAAATCTGCAAAAAGCTTTTCATATGATGATATTTACGCACGTCACTTGGATGACTATCAGAATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGTTCCAAGACGGTTTTAGGAAAACCTATTTTGGATGAAAAATTGGTTTCTGGTCAAACTAACATCTCTCAATTGGGAGGTGATTCTGCTGTTCCAACTTCATCGAGAGTCAATTCGTTTCAAAATGATGAAGATCCTTCCTTTGTGGAACTTTTGTTTCAATATGGTCGATATCTGCTAATTGCTTGTTCACGTCCTGGAACTCAGGTGGCAAACCTACAGGGTATATGGAACAATAAAGTTGCACCTGCATGGGATGGGGCTCAGCACTTGAACATAAATCTTCAAATGAATTATTGGCCATCTCTTTCTTGCAACCTACATGAGTGTCAAGAGCCATTATTTGATTATATTTCCTCTTTGTCTGTCGCCGGTAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGCACATCAAGTTTCTGACTTATGGGCTAAAACATCGCCAGATCGAGGTGAGGCTGTTTGGGCTTTATGGCCGATGGGTGGAGCTTGGCTTTGTACCCATCTATGGGAGCATTACAGTTATACAATGGACAAGGAATTTCTTAAAAGTAAAGCATATCCTTTGCTGGAAGGATGTACATTATTTTTGTTGGATTGGTTGATCAAAGGCCCTGGTGGATTATTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCATTGCACCAGATCAAAAGCAAGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTATAGTCGTTTCTGCTGCTGAGGTTTTGGGAAAACATGATGATGCTATTATCAAAAGAGTAATTGAGTCTCAGTCCAAGCTTCCTCCTACAAAAATTGCTAGGGATGGGTCCATTATGGAATGGGCTGAAGATTTCCAGGACCCAGATGTACATCATCGGCATGTTTCACATCTGTTTGGTTTGTTTCCGGGGCACACAATAAATCTTGAGAAAACTCCAGATCTCTGTAAAGCTGTGGATTATAGTCTAATTAAAAGAGGAGACGAAGGTCCTGGGTGGTCAACAACTTGGAAAGCTGCATTGTGGGCTCATCTCCATAACAGTGAGCATGCGTATCGCATGATAAAACATTTGATTATATTGGTGGACCCTGAGCGTGAAAAAGATTTCGAAGGAGGACTTTATAGTAACCTGTTCACAGCACATCCTCCTTTCCAAATTGATGCAAACTTTGGTTTTTCATCTGCAATTGCAGAAATGCTTGTTCAGAGCACAACAAAGGACCTCTACTTACTTCCTGCATTACCTCGTGATAAATGGGCAAATGGTTGTGTGAAAGGATTAAAAGCGCGTGGCGGTGTTACGGTCAACATCTGTTGGAAAGAAGGAAATTTGCATGAAGTTGGCCTTTGGTGTCAAAACCAGAATTCCAAAATGAGACTACATTATAAAGGGAGCATGGTCGTGACAAATTTATCACCAGGCAAAGTTTACTCGTATAATAATTGGTTGAGGTGTATTAAAACATACCCCCTTAATGAGGTGAATCTTTAA 2532 0.4084 MEDGDWVLVRSPSQKDLWNPSSPNAADNEPSRPLKLTFSAPAKYWTDAIPIGNGRLGAMVWGGVQTELLQLNDDTLWTGIPGNYTDKNAPEVLAEVRKLVDDKKYPEATTAAVKLSGAPSEVYQLLGDIKLEFDDSHIKYSEESYHKELDLDSATAKIKYNVGDIEFTREHFASKPDQVLATKFSTSKSGSLSFTVSLDSELHHNSRVSGQNQIIMEGSCPGKRIAPQMNSSGEQKGIQFCAVLDMQISNDKGVIHVLDDKKFRVEGSDWAILLLTASSSFDGPFTNPEDSKKDPTTESLSKMKSAKSFSYDDIYARHLDDYQNLFHRVSLQLSKSSKTVLGKPILDEKLVSGQTNISQLGGDSAVPTSSRVNSFQNDEDPSFVELLFQYGRYLLIACSRPGTQVANLQGIWNNKVAPAWDGAQHLNINLQMNYWPSLSCNLHECQEPLFDYISSLSVAGSKTAKVNYEANGWVAHQVSDLWAKTSPDRGEAVWALWPMGGAWLCTHLWEHYSYTMDKEFLKSKAYPLLEGCTLFLLDWLIKGPGGLLETNPSTSPEHMFIAPDQKQASVSYSSTMDISIIKEVFSIVVSAAEVLGKHDDAIIKRVIESQSKLPPTKIARDGSIMEWAEDFQDPDVHHRHVSHLFGLFPGHTINLEKTPDLCKAVDYSLIKRGDEGPGWSTTWKAALWAHLHNSEHAYRMIKHLIILVDPEREKDFEGGLYSNLFTAHPPFQIDANFGFSSAIAEMLVQSTTKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGNLHEVGLWCQNQNSKMRLHYKGSMVVTNLSPGKVYSYNNWLRCIKTYPLNEVNL* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4062 843 PIRSF UCP007663 10 839 IPR016518 GO:0004560
Mtr1g4062 843 Gene3D - 271 747 IPR012341 GO:0005975
Mtr1g4062 843 MobiDBLite consensus disorder prediction 12 33 - -
Mtr1g4062 843 Pfam Glycosyl hydrolase family 65, N-terminal domain 36 283 IPR027414 -
Mtr1g4062 843 PANTHER - 1 841 - -
Mtr1g4062 843 SUPERFAMILY Six-hairpin glycosidases 293 793 IPR008928 GO:0005975
Mtr1g4062 843 MobiDBLite consensus disorder prediction 14 28 - -
Mtr1g4062 843 PANTHER ALPHA-L-FUCOSIDASE 2 1 841 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4062 K15923 - gmx:100817294 1427.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4062 1 52172478 52178228 Mtr1g4062 1 52172478 52178228 ECH