Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4039 ATGAACAGCGCTATTCTGAGGAACCGTTCTAAGGTTTCTCATTTCATGACCATGCAAATGTTCACTAACCATTCCATTAATCAAATCAAACTTCATTCTAACAAACACTATTCAAAACCTTACTTTCGATTACCTAATAATTTCTTCACCAAAAAAACCAGACAGTGTGAAATTTCTCCATCATCGTTTTCTTCTTCTTCTTCTTCTTCATCATCAACTGCATCTATTCCTAAGGTTGGTTTTGTTGGTTGGTATTTGGGGATGATAAAATCACGCCCTATTCTCACTAAAAGTGTTACCTCTGCACTCATTTATACTGCTGCTGATTTATCCTCTCAGACTATTGAGCGGCAATCTTCAAAATCTTTTGATTTTATAAGGACTTTACGCATGGCGGGATATGGGATGATCATTTTAGGACCATCATTGCATTTCTGGTTCAATTTTGTGTCAAAGCTTTTTCCAGGGAGGGATATTTTCTCTACATTGAAGAAAATGGCCATGGGCCAGGGGATTTATGGACCTGCCATGACTGTTATTTTCTTCTCCTTGAATGCAGGTTTGCAAGGTGAAAACAGCAAAGAGATTGTTGCACGTTTAAAGCGTGATTTGCTTCCTACGATGTTAAATGGAGTCATGTACTGGCCTATGTGTGATTTTATTACTTTTAGATTCGCTCCTGTCCATTTACAGCCATTAGTCAGCAATTCATTTTCGTACTTGTGGACCATTTATATGACCTATATGGCAAGCCTAGAGAAAGCCGAGACAGCTAGTTGA 780 0.3821 MNSAILRNRSKVSHFMTMQMFTNHSINQIKLHSNKHYSKPYFRLPNNFFTKKTRQCEISPSSFSSSSSSSSSTASIPKVGFVGWYLGMIKSRPILTKSVTSALIYTAADLSSQTIERQSSKSFDFIRTLRMAGYGMIILGPSLHFWFNFVSKLFPGRDIFSTLKKMAMGQGIYGPAMTVIFFSLNAGLQGENSKEIVARLKRDLLPTMLNGVMYWPMCDFITFRFAPVHLQPLVSNSFSYLWTIYMTYMASLEKAETAS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4039 259 Pfam Mpv17 / PMP22 family 188 246 IPR007248 GO:0016021
Mtr1g4039 259 PANTHER OS12G0508100 PROTEIN 1 257 - -
Mtr1g4039 259 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 257 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4039 Mtr-Chr1 51994819 51999648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4039 78 254 Miscellaneous Gene Families AT2G14860 74.011 5.07e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4039 K13348 - gmx:100810534 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4039 1 51994819 51999648 Mtr1g4039 1 51994819 51999648 ECH