Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4038 ATGACGGTACCAAAGCAAAACTATACTCGAATAAACACTTTGGAGCTGAAAGCTGTTATTGTAAAGAAGGTTGGTAATCAGAGAGCTGGCACGTACTTTGATCAGCTTGGGAAGTTGGTTAGTTCAAAGATCAGCAAAGCTGAGTTTGACAAGATTTGCATCACGACGATTGGAAAGGAAAATGTTCCTCTCCATAATCAACTCATTAGGGCAATTTTGAAGAATGTTTGTTTGTCTAAAGTTCCACCTCATAGAAGTTCTGCAAAAAAAGAGAGGGTCTTGAATGCAAAAGATTCAAATCGGCAGCAGAGCAGATCAATTCAAATGCAGTACGGGGATGCCTTTCCTCCTTCTCTGCGCAGGGGTGGTTCTTTGGCTACTTGTGAAGGGATGCTTACGGGTCGTCAGAGTGCTTTGGGACAGTTAGGGAAGCCCCGAAACCTTGGATCTAAAGATTTGATCTATAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGCAGACCTCCTATTTCTGTTGAAGATGGAGAAGAGGTTGAACAGCTCGGTGGAAGCCCAAGCCCAAGCATTCAAAGTAAGAGTCCTGTTGCAGCCCCTCTTGGGGTATCCATGAATTCTGGTTATGGACGTAGTCCTCTTTCTATTGCATCATCATGCAGAAAGCATCCTCGAGAAACCTGTTTCAGCAATGGATATCTCCCTGACACATCATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGAAGAAGGAGGGTTTAACCGTGACAGTGGATTGTGTAAATCTATTGAATAATGCAATGGATTCTTATCTGAAGAGGTTGGTTGAATCCTCTACGGGTTTATCATCTGGGTTGAGATTCGGGAATGAGCACCGAAGACAAGGAAATGGACAGTCAATAGCTGATTCAAATATACTGCAACCCAGAAGGTATATGCAAACAGCAACACAATCTTCTTGCGCATCTCTCTTGGATTTTCGCGTTGCAATGGAATTAAATCCACAAGTTCTTGGACCAGATTGGCCCACACAGCTTGAGAAGATTTGTATACGTGCTTCTAATGAATGA 1077 0.4336 MTVPKQNYTRINTLELKAVIVKKVGNQRAGTYFDQLGKLVSSKISKAEFDKICITTIGKENVPLHNQLIRAILKNVCLSKVPPHRSSAKKERVLNAKDSNRQQSRSIQMQYGDAFPPSLRRGGSLATCEGMLTGRQSALGQLGKPRNLGSKDLIYKTPEQQSATELNSLGSRPPISVEDGEEVEQLGGSPSPSIQSKSPVAAPLGVSMNSGYGRSPLSIASSCRKHPRETCFSNGYLPDTSSLRSRLEQKLKKEGLTVTVDCVNLLNNAMDSYLKRLVESSTGLSSGLRFGNEHRRQGNGQSIADSNILQPRRYMQTATQSSCASLLDFRVAMELNPQVLGPDWPTQLEKICIRASNE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4038 358 MobiDBLite consensus disorder prediction 284 303 - -
Mtr1g4038 358 MobiDBLite consensus disorder prediction 160 207 - -
Mtr1g4038 358 MobiDBLite consensus disorder prediction 188 203 - -
Mtr1g4038 358 MobiDBLite consensus disorder prediction 87 108 - -
Mtr1g4038 358 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 357 - -
Mtr1g4038 358 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 357 IPR024738 GO:0070461
Mtr1g4038 358 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 282 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4038 Mtr-Chr1 51991476 51993503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4038 - - gmx:100817344 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4038 1 51991476 51993503 Mtr1g4038 1 51991476 51993503 ECH