Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4034 ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACATTTCAGACTGATGGGAACAACAATGTTAGGTATGTTGCAAGTGAGTTGGCATCAGATATTATTGTTAGCATAGGGGATACAAAGTTTTACTTACACAAGTTTCCTCTCATATCAAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAATAATGAAGAAAACATCAACGAAATTCAAATTTCAGACATTCCTGGTGGTGCAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTACGGCATGACTGTTACCCTCAATGCTTACAATGTGATTGCTACTAGATGTGCAGCAGAGTATCTTGGAATGCACGAAAACATTGAGAAAGGAAACCTTCTTTTCAAGATCGATGTTTTCCTAAGCTCTAGCATTTTTCGTAGTTGGAAGGATTCCATTATCCTTCTTCAGACTACAAAGTCTATGTCGCCATTGGATGAGGAACAAAAGGTTGTCAACCGTTGCATTGAATCTATAGCAAACAAGGCATGCGTCGATGTGTCTAAAGTTGACTGGTCTTACACGTATAACCGAAAAAAGCTTCCGGAAGAAAATGGCTTTGAGTCAAACCAGAATGGAGTTAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGCGAACTTGAAGTTGACATGTACAAATCTGTTATAACAAATATCAAAACCAAGGAAATTCAATCTAATGATGTAATTGGTGAAGCCTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGAGGATGTGTCAAAGCATCGGTTAATAGTTGAAACTATTGTGAAGTTGTTGCCTTCCGATAAAGGCAGTGTTTCGTGTAGGTTCTTAGTCAAGCTATTGAAAGCTGTGATTTTTGTAGAATCAGAAGATAGGATCAGAGATGTGCTAGTAAAGAGAATTGGTCAGCAACTAGAGGAGGCTTCGGTAAACGATATTTTGATTAAAGCACCAGATGGAGAGATTACAATGTATGATGTTGGTATAGTACAGAAAATTGTAAGGGAGTTTCTTATGAAAGATCACAATTCCGAGATTGAATTGGTTGGAGGTGGCGAACTTGAAGGGATAAGAAAGCCGGGGATTTTATCAGATGCCTCTAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGCTGAAATTGCGAAGGATCCTAATTTACCATTGTTGAATTTTGTTAATCTTGCTGAGTTAGTTTCTAGGATCTCTCGTCCGTCTCATGATGGCCTTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGTATCAGCAAAGGTGAAAAGAAGAGTATATGCCAGCTAATGGATTGCAGAAAGCTGTCAGTTGATGCATCCTTGCATGCAGTGCAAAACGAGAGGCTACCGACACGTGTAATTGTGCAGGTACTACATTTCGAGCAGGTCAGAACCGCCGCGTCATCGGGTACTAGCACTCCAGACATAGCTAAAGGAATCAAAGACTTGAGCATTGGATCCAACGGTAGCTCAAGGTCGGGAACAACTAATCCGGAATATGACACGGATGGTGCAGGGACAGCTGAGGAATTAAAGGCATTAAGAAAGGAACTTGCATCGTTGAGACAAAGCAACGGAGTAGGAAACAGTTTCAAAGATGGAGATGCTAAACCAAACATGGATAAGGCTGTTATTGGAAAAATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAGGGAGGACATGGTGAAAATAGTGGCTCAGATTCATCTGAGAGTATTGGTTCTGTTAACCCTGAAGAAGTTAAATCTACACCATCCAGAAATAGGAGGAATTCAGTTTCCTAA 1878 0.4026 MKFMKLGSKPDTFQTDGNNNVRYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRRNSVS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4034 625 MobiDBLite consensus disorder prediction 493 528 - -
Mtr1g4034 625 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Mtr1g4034 625 MobiDBLite consensus disorder prediction 593 625 - -
Mtr1g4034 625 PANTHER OS12G0117600 PROTEIN 1 622 IPR043454 -
Mtr1g4034 625 Pfam BTB/POZ domain 27 117 IPR000210 GO:0005515
Mtr1g4034 625 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Mtr1g4034 625 SUPERFAMILY POZ domain 22 116 IPR011333 -
Mtr1g4034 625 CDD BTB_POZ_NPY3-like 21 125 - -
Mtr1g4034 625 SMART BTB_4 30 128 IPR000210 GO:0005515
Mtr1g4034 625 Gene3D Potassium Channel Kv1.1; Chain A 15 121 IPR011333 -
Mtr1g4034 625 MobiDBLite consensus disorder prediction 508 526 - -
Mtr1g4034 625 Pfam NPH3 family 211 464 IPR027356 -
Mtr1g4034 625 MobiDBLite consensus disorder prediction 588 625 - -
Mtr1g4034 625 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 622 IPR029960 GO:0009958
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4034 Mtr-Chr1 51955170 51960722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4034 8 494 EF-hand Containing Proteins AT3G44820 34.297 2.47e-94 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4034 - - gmx:100807318 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4034 1 51955170 51960722 Mtr1g4034 1 51955170 51960722 ECH