Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4018 ATGATGATTAGTGCTAAAATGAAGGTTACTGCAAAATGCTGCAATTTGTTGTTCATCACCACCTCTTTCCTTTTATTTATCTCAGGGCTAGGCGTTCATTCTTTGGACTATGATTATTTTGCTACTATTGAGTGTATGAAAGAACCTCAAAGAGCACAATATGGAGGGGGAATTATAGTAAATTCCGGATTTGATCACAACATAGAGGGTTGGACAGTATTTGGAAATGGAACAATTGAGGAACGTATATCAAATGATGGAAATAGATTCATTGTTGCCAGCAAAAGAACACAATCATTAGATAGTTTTTCACAAACGGTTCAGCTAGAGAAAGGATTGATATATACTTTTTCAGCTTGGCTTCAGCTGAGTGAAGGAAGTGACACAATTTCTGTGGTATTTAAAACAAATGGAAGTGATCAACTGGTGCATGGTGGCCATGTGATAGCAAAGCATGGATGTTGGTCTCTTCTAAAAGGTGGCATAGTTGCAAACTTCTCGAGCCCTGCTGAGATTCTTTTCGAGGTACGTAAGAGTAGAGTGAGATTCCATGTAAGTAATGTAAATGAAACAGCATTGGAAGGAGCAACAGTTGTGATAACACAAACAAAGGCAGATTTCCCATTTGGATGTGGGATGAACCATCATATACTCACAAACATTGACTACCAGGAATGGTTTGTGTCAAGATTCAAATACACAACTTTCACCAATGAAATGAAATGGTATAGTACAGAAATAATTCCAGGCCAAGAAAACTACACTATCTCAGATGCAATGTTAGAATTTGCTAAAGATAATGGAATTTCTGTCAGAGGTCATAACATTTTCTGGGACGATGAAAAATATCAACCTGAATGGGTTAAGTATTTATCGCCCGATGAATTGCGCAAAGCCGCGAAAAAAAGAATCGAATCTGTTGTTAAAAGGTATAAAGGAGAATTGATTGCATGGGATGTGGTGAATGAAAATGTCCATTTTCACTTTTATGAGGACAAACTAGGTGAAAATGCATCTGAATTATACTATTTAAAAGCTCATGAGCTTGATCCAGAAACAAAATTGTTTATGAATGAGTATAATACTATTGAATATAGTGGAGATAAAGTTGTTAGCCCACCCAACTATCTCAAAAAACTTGAGGAGATTATGCAATCTGGAGAAGCTACTGAAATATTATTTGCCATAGGATTGCAAGGCCATTTTGCAAGTGGCCAGCCAAATCTTGCTTACATGAGGTCAGGTCTAGATTTTCTTGGTAATATTGGATTTCCAATATGGCTCACAGAAGCCAGTTTGGATCCTCAGCCAAATCAGGCAGAGTATTTTGAAGAGGTACTAAGAGAGGCTTATTCTCATCCAGCAGTTGAAGGGATTATAATGTTTGCTGGTCCAGCACAAGCTGGTTTCAACAGTACACTTCTTGCAGATACAAATTTCCAAACTACTCCAACTGGACAAGTTGTGGACAATTTGATTCTTGAATGGGGAAGTGGGCCTTATACAGCCATAGCAGATAGTAGAGGAATTGTAGATATTTCATTACATCATGGAGATTATGATGTAACTTTTACACATCCTTTAACTCAAAACTCCAAAAAATTAAACATAAGTGTCAGAAAAGGATTTTCACAGGAAAACATCCATGTGAAAATGCATGCCTAA 1665 0.3706 MMISAKMKVTAKCCNLLFITTSFLLFISGLGVHSLDYDYFATIECMKEPQRAQYGGGIIVNSGFDHNIEGWTVFGNGTIEERISNDGNRFIVASKRTQSLDSFSQTVQLEKGLIYTFSAWLQLSEGSDTISVVFKTNGSDQLVHGGHVIAKHGCWSLLKGGIVANFSSPAEILFEVRKSRVRFHVSNVNETALEGATVVITQTKADFPFGCGMNHHILTNIDYQEWFVSRFKYTTFTNEMKWYSTEIIPGQENYTISDAMLEFAKDNGISVRGHNIFWDDEKYQPEWVKYLSPDELRKAAKKRIESVVKRYKGELIAWDVVNENVHFHFYEDKLGENASELYYLKAHELDPETKLFMNEYNTIEYSGDKVVSPPNYLKKLEEIMQSGEATEILFAIGLQGHFASGQPNLAYMRSGLDFLGNIGFPIWLTEASLDPQPNQAEYFEEVLREAYSHPAVEGIIMFAGPAQAGFNSTLLADTNFQTTPTGQVVDNLILEWGSGPYTAIADSRGIVDISLHHGDYDVTFTHPLTQNSKKLNISVRKGFSQENIHVKMHA* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4018 554 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 44 176 - -
Mtr1g4018 554 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 175 551 - -
Mtr1g4018 554 SUPERFAMILY (Trans)glycosidases 193 500 IPR017853 -
Mtr1g4018 554 Pfam Carbohydrate binding domain 57 158 IPR003305 GO:0016798
Mtr1g4018 554 Gene3D - 46 193 - -
Mtr1g4018 554 Gene3D Glycosidases 196 496 - -
Mtr1g4018 554 Pfam Glycosyl hydrolase family 10 203 450 IPR001000 GO:0004553|GO:0005975
Mtr1g4018 554 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 194 492 IPR001000 GO:0004553|GO:0005975
Mtr1g4018 554 PANTHER GLYCOSYL HYDROLASE 175 551 IPR044846 GO:0004553|GO:0005975
Mtr1g4018 554 PANTHER GLYCOSYL HYDROLASE 44 176 IPR044846 GO:0004553|GO:0005975
Mtr1g4018 554 SUPERFAMILY Galactose-binding domain-like 55 187 IPR008979 -
Mtr1g4018 554 SMART glyco_10 240 493 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4018 Mtr-Chr1 51801914 51804912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4018 33 539 Glycoside Hydrolase AT4G33840 47.698 2.15e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4018 - - gmx:100777980 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4018 1 51801914 51804912 Mtr1g4018 1 51801914 51804912 ECH