Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4015 ATGATGAAGGTTGCAACAGAACTGTGCATATTTTTGTTCAACACATCCTGCCTTGTACTTATTTCAGGGCTCCAACTCCAATCTATGCCTTATGATTATTCTGCTACGACTGAGTGTGTCCCAGAACCTCAGAGAGCACAATATGGAGGTGGCATTATAGTAAATCCAGGATTTGATCACAACATTAAGGATTGGACGGTGTTTGAGCATGGAACAATCAAGGAACGAACATCAAATGATGGAAATACATTTATTGTTGTCAGCAACAGAACACAACCATTAGATAGTTTATCACAAAAAGTCCAACTGGAGAAAGAAATGATATATATTTTTTCTGCTTGGTTCCAGCTGAGTGAAGGAAGTGACACAATTTCTGTGGTATTTAAAATAAATGGAAGTGAATTGGTAAAAGGTGGCCATGTGATAGCAAAATATGGATGTTGGTCTCTTCTAAAAGGAGGCATAGTTGCAAAATTTTCAAGCCCTGCTGAAATCCTTTTTGAGAGCAAGAATCCAAGTCCAGGTGTGGAATTATGGACTGATAGTGTCTCTTTACAACCATTCAACAAAACACAATGGAGATCACACCAAGCCGACAGCATTGAGAGGGTACGTAAGAGCAAGGTGACATTCCAAGTAAATCATCTAAACGAAACATCATTGGAAGGAGCAACGGTTGTCATCAAACAAACAAAGGCAGATTTCCCATTCGGATGTGGGATGAACTATCACATCCTCACAAACATTGAGTACCAGAAATGGTTTGTGTCAAGATTCAAGTACACAACTTTCACTAATGAGATGAAGTGGTATAGTACAGAGAAAATTCAAGGCCAGGAAAACTATACTATTCCTGATGCCATGCTGAAATTTGCCAAAGAAAATGGCATTTCTGTCAGAGGTCATGCCATTTTGTGGGACGATGAAAGATTTCAGCCCCAATGGGTGAAGTCCCTATCTCCTGAAGAATTACGAGAAGCGGCTGCAAAAAGAATGAAATCTGTGGTTTCAAGATATAGTGGACAATTAATTGCATGGGACGTTGTGAACGAGAATGTCCATAACCGCTTTTTTGAGGACAAACTCGGCGAAAATGCCTCTGCAGTATATTATTCAACAGCGTACTATCTTGATCCGAACACCAGCATGTTTATGAATGAATTTAACACCATTGAATTCAGTCCAGACCAAGTTGCCAGCCCACCCAATTATATCAGGAAACTTAAGCAGATTCAACAATTTCCAGGCACTACTGGAATGTTATTGACTATAGGGGTGCAAGGCCATTTTTCACGCGGCGTGCCAAACATTGCTTACATGAGGTCAGGTCTAGATCTTCTTGGTGCAACTGGACTTCCTATATGGCTCACTGAAAGTAGTGTGGATTCTAATCCAAATCAGGCAATGTATTTTGAAGAGATACTAAGAGAGGCTTACTCTCATCCAGATGTTGAAGGGATTATAATGTTTGTAGGTCCAGCACAAGCCGGTTTCACCAACACACAACTTGCAGACGCAAATTTTCAAAATACTCCAACCGGAGACGTTGTGGACAAGCTTATTGGTGAGTGGGGAACTGGAACTCATACAGCCATAGCAGACAGTAGAGGAATGATAGATATTTCACTACATCATGGAGATTATGATGTAACTGTTACACATCCTCTAATCCGATACTCCAAAAAACTGAATATAAGTGTAAGGAAAGGATTTTCACCGGAAACCATCCATGTAAAAATGCATGCCTAA 1749 0.4019 MMKVATELCIFLFNTSCLVLISGLQLQSMPYDYSATTECVPEPQRAQYGGGIIVNPGFDHNIKDWTVFEHGTIKERTSNDGNTFIVVSNRTQPLDSLSQKVQLEKEMIYIFSAWFQLSEGSDTISVVFKINGSELVKGGHVIAKYGCWSLLKGGIVAKFSSPAEILFESKNPSPGVELWTDSVSLQPFNKTQWRSHQADSIERVRKSKVTFQVNHLNETSLEGATVVIKQTKADFPFGCGMNYHILTNIEYQKWFVSRFKYTTFTNEMKWYSTEKIQGQENYTIPDAMLKFAKENGISVRGHAILWDDERFQPQWVKSLSPEELREAAAKRMKSVVSRYSGQLIAWDVVNENVHNRFFEDKLGENASAVYYSTAYYLDPNTSMFMNEFNTIEFSPDQVASPPNYIRKLKQIQQFPGTTGMLLTIGVQGHFSRGVPNIAYMRSGLDLLGATGLPIWLTESSVDSNPNQAMYFEEILREAYSHPDVEGIIMFVGPAQAGFTNTQLADANFQNTPTGDVVDKLIGEWGTGTHTAIADSRGMIDISLHHGDYDVTVTHPLIRYSKKLNISVRKGFSPETIHVKMHA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4015 582 Pfam Glycosyl hydrolase family 10 231 468 IPR001000 GO:0004553|GO:0005975
Mtr1g4015 582 SUPERFAMILY Galactose-binding domain-like 49 190 IPR008979 -
Mtr1g4015 582 Gene3D - 41 189 - -
Mtr1g4015 582 SUPERFAMILY (Trans)glycosidases 222 527 IPR017853 -
Mtr1g4015 582 Gene3D Glycosidases 224 526 - -
Mtr1g4015 582 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 222 520 IPR001000 GO:0004553|GO:0005975
Mtr1g4015 582 SMART glyco_10 268 520 IPR001000 GO:0004553|GO:0005975
Mtr1g4015 582 PANTHER GLYCOSYL HYDROLASE 30 571 IPR044846 GO:0004553|GO:0005975
Mtr1g4015 582 PANTHER ENDO-1,4-BETA-XYLANASE 5-RELATED 30 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4015 Mtr-Chr1 51762444 51766864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4015 22 567 Glycoside Hydrolase AT4G33840 49.727 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4015 - - mtr:MTR_1g106770 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4015 1 51762444 51766864 Mtr1g4015 1 51762444 51766864 ECH